| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1896 |
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| Symbol | gabD2 |
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| ID | 7858289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2158880 |
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| End bp | 2160457 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643865987 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002881914 |
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| Protein GI | 229820388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0774161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000854117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGCGA GCACGGACCG GACGGACCTC GTCCTCCCGC ACACCCTCAC GGGCGCGCGG
CTGCGCGCGC TCGCCGGGGG GATCGCCGCC ACCGGACCCG CCGCGGACGT CGAGGCGCCG
TTCACCGGCG CGCTGCTGAC CCGGCACGCC TCGTCCACCA CGGCGGACGT CGACGCCGCG
GCCGACCGAG CGCGATCAGC CGCCGGACGC TGGGCAGCCA CCCCGGTCCG GGAGCGCGCC
CGCGTGCTGC TGCGCCTCCA CGACCTCCTG CTGGACGAGA TCGACCCCCT GCTCGACCTG
GTCCAGGCGG TCACCGGCAA GGCCCGCGGG CACGCGCTCG AGGAGCTGCT CGACGTGGTG
AACGTGTGCC GCTACTACGC GCGCACCGGG CCGCGGACCC TCGCTCCGCA CCGCCGCGCC
GGTGCGATCC CCGTGCTCAC CCGGACCACG GAGCTGCGCC ACCCGGTCGG GCTGGTGGGC
CTCGTCACTC CGTGGAACTA CCCGCTCGCG CTCGGCGTCT CCGACGCGCT GCCGGCGCTC
CTCGCCGGGA ACGCCGTGCT GCACAAGCCG GACACCCGCA CCGCGCTCGT CACGCTCGCC
GGCCGGGAGC TCGCCGTCGC CGCCGGGCTG GACCCCGACC TCTGGCAGGT GGTGGTCGGC
GACGGCGCGG TGGTCGGGAA CCGCGTCACC GACCTCGTGG ACCACATCTC GTTCACGGGT
TCCACGCCCA CCGGGCGGGT GGTCGCGGCG CGGGCGGCCT CACGACTCAT CGGGGCCACG
CTGGAGCTCG GCGGGAAGAA CCCCATGATC GTGGCGCCCG ACGCCGACCT CGCGGCCGCC
GTCGCCGGCG CCGTCCGCGG CAGCTTCTCC TCGAGCGGGC AGCTCTGCAT GTCCATCGAG
CGCATCTACG TGCACCGCTC GATCGCCGAG ACCTTCACCC GCGAGCTCGC CGCGGCCACG
CGCGACCTCC GGGTCGGCGC CGACTACTCG TACGCGTACC AGATGGGCTC GCTCGTCTCC
GCCGACCAGC TCGAGCGGGT CTCCGCGCAC GTCGACGACG CCGTCGCGGC CGGTGCGCGG
GTGCTCGCAG GCGGGCGTCC GCTCCCGGAG CTCGGACCGT ACTTCTACGC GCCGACGGTG
CTCGCGGACG TGCCGCCCAC CGCTCGCGCC TACCGGTCCG AGACGTTCGG CCCGGTGGTC
TCCGTGTACC CGGTGGACTC CCTCGACGAC GCCGTGCGCG CCGCCAACGA CTCGGAGCTC
GGCCTCAACG CGTCGGTGTG GTCGCGCGAC ACACGGCGGG CGCGCGCCCT CGCCGCACGG
CTGCGCGCGG GTTCGGTCAA CGTCAACGAG GCGTACACGG CGGCGTGGGG CTCCATGGAC
GCGCCGAGCG GCGGATGGGG TGACTCGGGC CTCGGGCGCC GGCACGGGAC GGCCGGTCTC
CACGAGGTCA CCTGGGCCCA GACCGTCGCG CACCAGCGCG TGTGGCCGAT CGGCGAGCAC
GGCCCGCTCA CCGGGCGCCG CTACCAGGGC GTGATGACGA CGGCGCTGCG TGCGCTGCGC
GTCGTCGGCC GGCGGTGA
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| Protein sequence | MPASTDRTDL VLPHTLTGAR LRALAGGIAA TGPAADVEAP FTGALLTRHA SSTTADVDAA
ADRARSAAGR WAATPVRERA RVLLRLHDLL LDEIDPLLDL VQAVTGKARG HALEELLDVV
NVCRYYARTG PRTLAPHRRA GAIPVLTRTT ELRHPVGLVG LVTPWNYPLA LGVSDALPAL
LAGNAVLHKP DTRTALVTLA GRELAVAAGL DPDLWQVVVG DGAVVGNRVT DLVDHISFTG
STPTGRVVAA RAASRLIGAT LELGGKNPMI VAPDADLAAA VAGAVRGSFS SSGQLCMSIE
RIYVHRSIAE TFTRELAAAT RDLRVGADYS YAYQMGSLVS ADQLERVSAH VDDAVAAGAR
VLAGGRPLPE LGPYFYAPTV LADVPPTARA YRSETFGPVV SVYPVDSLDD AVRAANDSEL
GLNASVWSRD TRRARALAAR LRAGSVNVNE AYTAAWGSMD APSGGWGDSG LGRRHGTAGL
HEVTWAQTVA HQRVWPIGEH GPLTGRRYQG VMTTALRALR VVGRR
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