| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1854 |
|---|
| Symbol | |
|---|
| ID | 7860476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2116485 |
|---|
| End bp | 2117234 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643865945 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_002881872 |
|---|
| Protein GI | 229820346 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.392852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGCG ACCGCACGTC CGACGCCGCG ACGTCGGCGG ATGCGACGGC GGAGGCACGG
GTCGGCCGAC GCCGTTGGGG CTGGTGGGTC GCCGCCGGCG TCGCTGTCTT CCTCCTGGTG
GTCGCCGCGC TCCAGGTGGC GGGGGGAGGG GACGGGTTCG CGACGATCAC CGCGAGCGTG
GCGGAGTGGG CCTACCTGTC CGTCTTCCTG CTCGTGTTCC TGGACGGGAT CTGCGCCCTG
TTCCCCGGCG AGACGACGCT GACGGCGGCA TCGACGCTGG CCGCGACGGG CGACCTCAGC
CTCCCGCTGG TCATGCTGGC CGGCGCTGGT GGTGCGATCG CCGGGGACTC GGCGCTCTAC
TGGATCGCAC GCGGCGCACG ACGCCGGTAC CGGGCCAAGC TCGCCGTCGC CGTCGAGAAC
GAGAAGGTGG CGAGCGTGCT GGCGATCATG GGCTCGAGCG CGCCACCGCT GCTCGTCGCC
GGCCGCTACG TCCCGGGGAT GCGCTTCGTC GTCAACGCCA CGTTCGGCAT CGCCGCACAC
CCGTACCGGC ACTTCCTGCT GTGGTCGGCC GTCGGCGGCT CGCTCTGGTC GGTCTACACG
TGTGGGCTGG CGTACCTCGT CGCCACGCAG CTGGGCGACT TCCCGTTCGC GTCGGTCGTG
GTGTCCGGCA CCATCACCAC GGTCGCGATC GCCGTGGTCC TGCTCGTGGC TCGCCGCAGG
CTCCGCCAGC AGCGCTCCGG CGACGCCTGA
|
|---|
| Protein sequence | MSSDRTSDAA TSADATAEAR VGRRRWGWWV AAGVAVFLLV VAALQVAGGG DGFATITASV
AEWAYLSVFL LVFLDGICAL FPGETTLTAA STLAATGDLS LPLVMLAGAG GAIAGDSALY
WIARGARRRY RAKLAVAVEN EKVASVLAIM GSSAPPLLVA GRYVPGMRFV VNATFGIAAH
PYRHFLLWSA VGGSLWSVYT CGLAYLVATQ LGDFPFASVV VSGTITTVAI AVVLLVARRR
LRQQRSGDA
|
|---|
| |