Gene Bcav_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1843 
Symbol 
ID7860465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2103075 
End bp2103791 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content74% 
IMG OID643865934 
ProductDNA alkylation repair enzyme 
Protein accessionYP_002881861 
Protein GI229820335 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.456011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCG TCGACGCCCT CACCGCCGCG GCGTTCACCG CACGGGTGCG GGGCGTCGCC 
ACAGCGGAGC AGCTCGCGGC GTACGACAGG TACTTCCCGC CCGCGGAACG CGGGGACGAC
GTCTTCGTCG GGGCTCGGAT GGGGCACGTG TTCGCGCTCG CCAAGGAGTT CGGCGCGATG
CCGTTGGACG AGGTCGAGCG CCTGCTCGAG AGCGACGTGC ACGAGGACCG CGTCGGTGCC
GTGAGCATCC TCGACGTCCG TGCCCGTGCG AAGGGCGCCA CCGTCGAGCA GCGTCGCGCC
CTGTACGACC TGTACCTGCG GCGGCACGAC CGCATCAACA CCTGGGACCT GGTCGACCGT
GCCGCCATCC ACGTCGTCGG CGCCTACGCC GCCGAGCACG ATCGAGGCGC GTTCGCGCGC
CTGGCGGCGT CCCCGGACCG GTGGGAGCGA CGGACGGCGC TGATCGCGAG CTTCGCGCTC
GTGCGGCGCG GGGAGACGGA CGACGCTCTC GCCGTCGCGG CCGCCTGCGT CGACGACCCG
GAGGACACCG TGAACAAGGC CGTCGGGTGG CTGCTGCGCT CCATCGGCGG CGCCGAGCTG
GTCGCGTTCC TCGAGGCGCA CGCTGCCGAC ATGCCGCGCG CGGCCCTGCG GGCCGCCGTC
GAGAAGCTCG AGCCCGACGT CAGGCGCCGG TACCTGCGGG CCGCTCGCGA AGGCTGA
 
Protein sequence
MDTVDALTAA AFTARVRGVA TAEQLAAYDR YFPPAERGDD VFVGARMGHV FALAKEFGAM 
PLDEVERLLE SDVHEDRVGA VSILDVRARA KGATVEQRRA LYDLYLRRHD RINTWDLVDR
AAIHVVGAYA AEHDRGAFAR LAASPDRWER RTALIASFAL VRRGETDDAL AVAAACVDDP
EDTVNKAVGW LLRSIGGAEL VAFLEAHAAD MPRAALRAAV EKLEPDVRRR YLRAAREG