Gene Bcav_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1841 
Symbol 
ID7860463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2101609 
End bp2102055 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content75% 
IMG OID643865932 
Producttranscriptional regulator, TrmB 
Protein accessionYP_002881859 
Protein GI229820333 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.122191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGG ACCAGGACGA CACCTCGGCG CTCTACCGCA CGTACCTCGC CGCCGTCGTC 
GCCTATCACC AGGCCGCCGG CGCGCGGCTG GGACTCGGGG CGACGGACTA CCAGGCGCAC
AACCTCCTCG CGCTCGAGGG CGCGATGACG ACAGGGGAGC TCGCCCGGCT GCTCGGGCTG
TCGCCGAGCG CGACGACGCG TGTGGTCGAC CGCCTGGTCG AGCGGGGCCT GGCCGAGCGC
GAGGTTGACG CGGAGGACCG TCGCAGGAGC GTGGTGGTCC CGACCTCCGC CCGCCCGGCC
GGCCTCGACG ACCAGCTCGC TCAGGTGCGG GAGCTCGTGG CGCCGGCGTT CGCGGGGCTC
GACGCCCGCG GCCAGGAGGT GCTGCGGGAC TACTTCGCGC GAGCGACGGA CGGATTCCGG
GAGGCCACGC GGCGGCTCGC CGTCTGA
 
Protein sequence
MTRDQDDTSA LYRTYLAAVV AYHQAAGARL GLGATDYQAH NLLALEGAMT TGELARLLGL 
SPSATTRVVD RLVERGLAER EVDAEDRRRS VVVPTSARPA GLDDQLAQVR ELVAPAFAGL
DARGQEVLRD YFARATDGFR EATRRLAV