Gene Bcav_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1830 
Symbol 
ID7860452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp2091010 
End bp2091567 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content73% 
IMG OID643865921 
Productorotate phosphoribosyltransferase 
Protein accessionYP_002881848 
Protein GI229820322 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.131476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0283563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACGC AGCCGACCGA GGCGATCCGG CCCGACCCGA CGCTCGCCCA CGACATCGAC 
GCGCTGTGCC GCCTGACCGG CGAGTTCACC CTCCGCTCGG GCCAGGTCGC CGCCGAGTAC 
TTCGACAAGT ACCTGTTCGA GGCCGACCCG GCGCTGCTGG CGCGGGTCGT CGAGCAGCTC 
CGGGGCCTCG TGCCGACCGG CACCGAGCTC CTCGGCGGGC TCGAGCTCGG CGGCATCCCG 
ATCGCGACGA TGCTGAGCGC GCGTACTCGG CTGCCGGCGG TGTTCGTCCG CAAGAAGGCG 
AAGGAGTACG GGACCCGCAA GCTCGCCGAG GGACCCGACG TCGCCGGGCG GCGGGTCACG 
CTCGTCGAGG ACGTCATCAC GACCGGCGGA GCGGTGCGGG ATGCGGCCAC CGCGTTGCGC 
GCGGCCGGCG CCGTCGTCGA CGTCGTGATC TGCGTCATCG ACCGGAGCCC GCCGGACGTG 
GAGCCGTTGG CCGACGCGGG TATCGAGGTC CGCTCCGTGC TCACACGTGC GGACCTCGAC 
GCCGCCCGAG CCGGCTGA
 
Protein sequence
METQPTEAIR PDPTLAHDID ALCRLTGEFT LRSGQVAAEY FDKYLFEADP ALLARVVEQL 
RGLVPTGTEL LGGLELGGIP IATMLSARTR LPAVFVRKKA KEYGTRKLAE GPDVAGRRVT 
LVEDVITTGG AVRDAATALR AAGAVVDVVI CVIDRSPPDV EPLADAGIEV RSVLTRADLD 
AARAG