| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1818 |
|---|
| Symbol | |
|---|
| ID | 7860440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2080687 |
|---|
| End bp | 2081322 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643865909 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_002881836 |
|---|
| Protein GI | 229820310 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.450783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00922336 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCG CCCGCGTCCA CGCCTTCGCG ATCTCCCTCG ACGGATTCGG TACCGGTGCA
GGTCAGAGCA AGGACCTTCA CTTCGGTCAC GCCGGTGATC GACTGCACCA GTGGCGGTTC
GCCACACAGT CGTGGCAGCA GACCAGTGGG AGCCGTGGCA TCGACAACCT CTTCGCCCTT
GAAGCCGGGG CGGAGATCGG TGCCGAGATC ATGGGTGCCG GCAAGTGGGG TCATCCCGGC
TGGGAGGACG ATCCGGACTG GAAGGGCGCG TGGGGCGCGA ACCCGCCGTT CCACACCCCC
GTCTTCGTCC TCACCCATCA TCCGCGCCCA TCGATCGAGA TGGAGGGCGG CACCACGTTC
CACTTCCTCG ACGCCTCACC TGCCGAGGCG CTCGAGCAGG CACGCAAGGC CGCCGATGGC
GACGACGTAC GGATCGGCGG CGGGCCCACC GTGATCCGCG ACTTCCTGGC TGCCGGGCTC
GTCGACTACA TGAGTGTGGC GATCGTCCCC ATCCTCCTGG GCAGGGGGGT ACGGCTCTGG
GACGGGCTCG AAGGCCTGGA GAAGACCTAC GACATCGAGT CCGTCGCGTC GCCGAGCGGC
ATCGTGCATG TCACCTTCAC CCGCACCGCG ACCTGA
|
|---|
| Protein sequence | MSLARVHAFA ISLDGFGTGA GQSKDLHFGH AGDRLHQWRF ATQSWQQTSG SRGIDNLFAL
EAGAEIGAEI MGAGKWGHPG WEDDPDWKGA WGANPPFHTP VFVLTHHPRP SIEMEGGTTF
HFLDASPAEA LEQARKAADG DDVRIGGGPT VIRDFLAAGL VDYMSVAIVP ILLGRGVRLW
DGLEGLEKTY DIESVASPSG IVHVTFTRTA T
|
|---|
| |