Gene Bcav_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1781 
Symbol 
ID7861289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2041407 
End bp2042648 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID643865869 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002881799 
Protein GI229820273 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGA GCATCCCGTT CGCCGCGCTC GCCGTGAGCG CCGCTCTCGT CCTGACCGCC 
TGCGGAGGCA GCGCGGGCAG CGGCGAGGAA GAGACACCGG AGGCGACCGA GTCGGCTCCC
GCTGCCGACG GCGGCACGAT CACCGTCTGG GTCGACGAGA CCCGCCAGGC CGCCGTCGAG
GAGGCCGCCG CCGTCTTCGA GGAGGAGACC GGCGCCACGG TCGAGCTCGT CCTGAAGAAC
TTCGAGGACA TCCGCACGGA CTTCCTCGCC CAGGTGCCCA CCGGCGAGGG CCCCGACATC
ACGGTCGGCG CGCACGACTG GCTCGGCGAG CTCACGGCCA ACGGCGTCGT CGCCCCGATC
GAGATCGGCG ACATGGCGGG CGAGTTCGAG CCCGTCTCGA TCGAGGCCTT CACGCAGGAC
GGCCAGGTGT ACGGGCTGCC GTACGCCGTC GAGAACATCG CGCTCATCCG GAACACGGCG
CTCGCGCCCG AGGCTCCCGC CAGCTGGGAC GACGCCGTCG CCGCCGGCAC CGCCGCGGGG
ACCCAGTTCC CCCTCCTGAT CCAGGTCAGC GAGGAGGGCG ACCCGTACAC GATGTACCCG
TTGCAGACCT CGTTCGGGGC GGGCGTGTTC GAGCAGAACG ACGACGGCAC GTACGCCCCG
GAGCTCGCGC TCGGCGGGGA GCCGGGCAAC GCGTTCGCCG GGTGGCTCGC GGAGCAGGGT
GCGGCCGGCG TGCTCGACAC GGCAGTGACG TACGACATCG CGGTCGCCGC GTTCGCGGCG
GGCGACTCGC CGTTCATCAT CGGCGGCCCC TGGATGATCG AGAGCTTCCC GGGTCTCGAC
CTCGCGATCG ACCCGATCCC GAGCGCCGGC GGCGAACCCG CTCGGCCGTT CGTCGGCGTG
GCCGGCTTCT ACCTCAGCGC GCAGAGCGAG AACGCGATCC TCGCGAACGA CTTCCTCGTC
AACTACATGT CGACCGAGGA GGCCCAGCTC GCGCTGTACG AGGCGGGCAA CCGGCCGCCG
GCCCTGACGG CCGCCGCCGA CGTCGCGTCC GAGGACCCCG TCACCGACGG CTTCCGTGCC
GTCGGGGCGG ACGCCTTCCC GATGCCGTCG ATCCCCGAGA TGGCCTCCGT GTGGGAGTTC
TGGGGCGTGA CCGAGGCCGG CATCATCAGC GGCTCCCTCG AGCCCACCGC CGGCTGGGAG
AAGATGGTCA CCGACATCCA GGGCGCGCTC GACGCCGCCT GA
 
Protein sequence
MRRSIPFAAL AVSAALVLTA CGGSAGSGEE ETPEATESAP AADGGTITVW VDETRQAAVE 
EAAAVFEEET GATVELVLKN FEDIRTDFLA QVPTGEGPDI TVGAHDWLGE LTANGVVAPI
EIGDMAGEFE PVSIEAFTQD GQVYGLPYAV ENIALIRNTA LAPEAPASWD DAVAAGTAAG
TQFPLLIQVS EEGDPYTMYP LQTSFGAGVF EQNDDGTYAP ELALGGEPGN AFAGWLAEQG
AAGVLDTAVT YDIAVAAFAA GDSPFIIGGP WMIESFPGLD LAIDPIPSAG GEPARPFVGV
AGFYLSAQSE NAILANDFLV NYMSTEEAQL ALYEAGNRPP ALTAAADVAS EDPVTDGFRA
VGADAFPMPS IPEMASVWEF WGVTEAGIIS GSLEPTAGWE KMVTDIQGAL DAA