| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1767 |
|---|
| Symbol | |
|---|
| ID | 7861275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2028078 |
|---|
| End bp | 2028764 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865855 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_002881785 |
|---|
| Protein GI | 229820259 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGGA ACGGGCGCTG GGCCAACGCC CGTGGGCTGC CCCGCACGGA GGGCCACGCG
GCGGGCGAGG CCGTGCTGCT CGACGTCGTG GCGGGCGCGA TCGAGCTCGG GATCACCCAT
GTCAGCGCGT ACGCGTTCTC CACGGAGAAC TGGAAGCGCT CGCCCGCCGA GGTGCGGTGG
CTCATGGGGT TCAACCGGGA CGTGCTGCGG CGGCGGCGCG ACGAGATGAG CTCCTGGGGC
GTCCGGGTGC GCTGGGCGGG GCGCCGGCCG CGGCTGTGGC GCAGCGTCAT CGCCGAGCTC
GAGGAGGCGG AGCGGGTCAC GCGTGACAAC GCGCTCTGCA CGCTGACGAT GTGCGTCAAC
TACGGCGGCC GCGCGGAGAT CGCCGACGCC ACGAGGGCGA TCGCGCGCGA GGTGGCCGCC
GGACGCCTGG ACCCCGAGCG GATCACCGAA CGCACGCTCG CGCGCCACCT CGACGAACCG
GACATGCCGG ACGTCGACCT GTTCCTGCGT ACCGGGGGAG AGCAGCGCGC CTCGAACTTC
CTCATCTGGC AGTCGGCCTA CGCGGAGATG GTGTTCCTCG ACAAGCCGTG GCCCGACGTC
GACCGCCGGG ACCTGTGGGC AGCGGCGCTC GAGTACGCGC GCCGGGACCG GCGCTACGGC
GGGGCCGTCG ACGCGCCGTC CGCCTGA
|
|---|
| Protein sequence | MDGNGRWANA RGLPRTEGHA AGEAVLLDVV AGAIELGITH VSAYAFSTEN WKRSPAEVRW
LMGFNRDVLR RRRDEMSSWG VRVRWAGRRP RLWRSVIAEL EEAERVTRDN ALCTLTMCVN
YGGRAEIADA TRAIAREVAA GRLDPERITE RTLARHLDEP DMPDVDLFLR TGGEQRASNF
LIWQSAYAEM VFLDKPWPDV DRRDLWAAAL EYARRDRRYG GAVDAPSA
|
|---|
| |