Gene Bcav_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1704 
Symbol 
ID7859646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1951073 
End bp1951690 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content73% 
IMG OID643865792 
ProductArabinose-5-phosphate isomerase 
Protein accessionYP_002881722 
Protein GI229820196 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCGTCGATGC CGACGCCCGC GCCCTCGACG CGGCGCTCGA GTCGCTGCGC 
ATCGAGTCCC GAGCCATCGA GGTGGCCGCC GGGCGGTCGT CCGAGGCGCT GCTCGCGGCC
ACTCGCCTGA TCGAGGCGCG GTCCGGCCGC CTCATCGTCT CCGGGCTGGG CAAGTCGGGC
CACATCGCCG CGAAGATGGC CGCCACGTTC GCCTCGACGG GAACGCCGGC GCACTTCGTG
CACGCGACGG AGGCTCTGCA CGGCGACTCG GGGATGGTGG TCCCCGGTGA CGTCGCCATC
CTCATCTCCA ACTCCGGGAC CACGGCCGAG GTGGTCCAGT TCGGCCGGAT GATCCGCGCA
CTCGGCGTGC CGGTGATCGC GATGGCACGC GACGCGTCCT CGCCGCTCGC GAGCCTCGCG
CAGGTCTGGC TGGACATCTC CGTCGAGCGG GAGGCGGACC CCCTCGGTCT CGCCCCGACG
GCGTCGACGA CGCTCACCCT CGCGCTCGGG GACGCGCTCG CCGCCGCCCT CATGACCCGG
ACCAACTTCG ACGACGCGGC GTTCGGCCTC CGTCACCCGG GCGGCGCGCT CGGTCAGCAG
CTGGGGGTCG ACGAATGA
 
Protein sequence
MSAPVDADAR ALDAALESLR IESRAIEVAA GRSSEALLAA TRLIEARSGR LIVSGLGKSG 
HIAAKMAATF ASTGTPAHFV HATEALHGDS GMVVPGDVAI LISNSGTTAE VVQFGRMIRA
LGVPVIAMAR DASSPLASLA QVWLDISVER EADPLGLAPT ASTTLTLALG DALAAALMTR
TNFDDAAFGL RHPGGALGQQ LGVDE