| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1557 |
|---|
| Symbol | |
|---|
| ID | 7859713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1785129 |
|---|
| End bp | 1787900 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865642 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002881575 |
|---|
| Protein GI | 229820049 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.432093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC CGACCGCCCG CCGCATCGTC GTCGCCGGGG CCCGTTCCGC CGTCGGCCCG
GCCGTCACGA TCGCCCTCGT CGTCCTGGTC ATCGCGGGGA CGCTCGCCGC GTGGCCGCGC
CTGCTCGACC GGATGTCCAC CGCCGAGCTG CGGTATCAGG TGGGACTGCT GGCACCCCAG
GTGCGGGACC CCTCCGGCGC CGTGAACAAC TGGCTCGCCG ACGACGTCGT CACCGGCACC
GAGCAGAGCC TCCCCGACGA CCTGTGGCCG CAGTGGCGGG CGTGGGACTC GACGCTGCAG
GCACTCCGCG ACCGGCAGGC GGAGCCGGTG CGGTCGGCCC TCGGCGACCC GCGCTACCGC
GCCGTCGCGC AGGACGCCGT CCCGACGGTC GAACGAACCG AGCTCCCCGA TCGCGCCTCG
GCGTCGGCGG TGCTCGTGCT CGACCCGTTC CTCGCCGACC GCGTGCGGCT CGTCGACGGG
ACGACCCCCG GCGCCGTCCC CGACGACGCG TTCGCCGTCG ATCCGGCCGA CCCGGCGACC
GGCGACGACG CGGTCCCGGT CGACCTGTGG ATGTCCGTGG ACAGCGCCGA CGAGATGCGC
TGGGAGGTCG GCGACACCCG GCGCGTCACC CTCGGCTCCG CCCCGTGGTC GGCCGGCGTC
GCCGATCTGC GGCTCACCGG GACGTTCGAG GCGCTCGACC CCGACGAGCC GTTCTGGCAG
CACACCCCGT CGACCCTGTT TCCGAACGTC GACGACAACC CGGACACCGG GTACCACGTC
ACGGCGCGGG CGATCCTCGA CCCGACGAGC GTCGCCGCGT TGCGGTTCGC CACCACCTGG
ACGAGCGAGG CGTGGTTCCC GTTCGACGTG TCCGACCTCA GCGCGACGAA CGCCCCCGCG
GCGCTCGCCG GGCTGCGCGG CCTCGTGGAC ACCCCGCTCC CGACCTCCGA GGCGGGCGGG
TTCCCGGCGG AGCTCGAGTG GGACACGCAG CTCGTGCCCG CGATCGAGCG CGTCCTCGGC
CGCTCCGCGG GGCTCGACGC CGTGTTCGCG CTCGTCGCGT CCGGACCGGT CGGCGTCGCT
CTGGCCGTCA TCGCGCTCAC GGGGCGCCTG CTGCTCGACC GACGCCGCGG CGTCCTCGCG
CTGGCGCTCG CGCGCGGCGC CTCGGGCGTG CAGATGCGGT CGGTGATGGC GCTCGAAGGG
CTGGTGCTCG GGGTTCCCGC CGCGGCGATC GGCGTCGCAG CCGCGGCTCT GCTCGTCCCG
GCCGACGTCG GCGCCGGGGC GTACGTGCTG CCGGCCGCCG TCGCGCTCGC CCCCGCCGTG
ACGCTGGCCG GCGTCACGAA CCGGCGCTCG CTGCGGCCCG TCCGGGAGGA CCTCGGCACG
GGCCGGGCGA AGGCGCGGGG TGTCGCGGAG CTCGTGCTCG TCGTCCTCAC GGCCGCCGCG
GTGGTGCTCC TGCTGCAACG CGGGCTCGTC GCGAGCGCCG GCGAGGCCGG GGTCGACCCC
CTCATCGTGG CGACGCCGCT GCTGCTCGCC ATGTGCACGG CCGTCGGGAC GATGCGCCTC
TACCCGCCGC TCGTGCTCGG CCTGGGACGC CGGCTGCGCA GCGGGCGCGG GCTCGTCCCC
TCCCTCGGGG CCGCGCGCGC GGCGCGTTCG CCGGTGCCCG GGCTCGCACC GGCGCTGTCC
GTGGTCGTCG GCGTCGCCAT CACCGTGTTC GCGGCGCTGC TGCTGCCCAC GATCCGCGGA
GGCGCCGAGA CCGCTGCGCT GCGCGACGTC GGCGCCGACC TGCGCGTCAG CGGACCCGTG
ATCACCGACG AACAGCTGGC CGCGATCGCG AGCCTCGACG GCGTCGCCGA CGTCTCGCCG
GTCGCGAACA ACGGCACCAC CCAGGTCCGG GAGGGCAGGG GCGGGGTCGC CGCCCCGGTG
TTCGCCGTCG ACATGGAGGC CCTCGCCCGG ATCCAGGCCG ACGTCCCGGG CGCCGCGCCG
ATCCCCGCGG GCTCAGCCGA GTGGCACGAC GGCGCCCTGC CCGCCGTGGC GTCGTCGCAG
CTCGTCGAGG ATCCCGACGC CGACTGGCGC CTGGCCCTGG CCGACCCCGT CCCGCTCGAC
GTCGTCGCGA CCGCTCCGGA CGCCGTCGGG ATCACGAACG CACCGACGTG GCTGCTCGCG
GACCGGGCGC TGCTGTCGGA GGTCACGAAC GCCGGGCTCG CGCCCCGGCT CGTGCTCGTC
TCGCTCGACG ACGGCGCGGA CCCGGCGAGC GTCGAGGAGC AGGTCCTCGC GCTGGTCGCG
CCGACCGCCG TCGCCACGAT GCCCGCCGAC TCGCTCGCGG ACTTCGACAC CTCACCGGTC
GTCAGCGGCA TGCGCACCGG GCTGGCGCTC ACCATCGCCA TCGCCGGGGT GCTCGCGGCG
CTGGCATGCG TGCTGACCCT CGCGATCGCC GCGCCGGCGC GGACCCGCCT CGTGGCCGTG
CTGCGTACGC TCGGGCTGCG GCCGCGGGAG GAGGTCGGCC TCGTGCTGTG GGAGATCGTG
CCCCTGCTGG CGGTGTCCGT CGTGGCGGGC GGGGTGCTGG GCGTCGCGTT CGGCGTGCTC
CTGACGCGGG TCGTCGACCT CCGTCCGTTC ACCGGCGGGT CCGAGCAACC GGGGATCGTC
GTCGACGGCC CGCTGCTGGG TCTCGTGATC GGCGGCCTGC TGGCCGTCGT GGCGCTCGCC
GTCGCGGTGA GCGCTCTTGT CGCACGGCGC CGCGCCGTCG GAGTGGTACT GAGGGTCGGG
GAGGACACAT GA
|
|---|
| Protein sequence | MSRPTARRIV VAGARSAVGP AVTIALVVLV IAGTLAAWPR LLDRMSTAEL RYQVGLLAPQ
VRDPSGAVNN WLADDVVTGT EQSLPDDLWP QWRAWDSTLQ ALRDRQAEPV RSALGDPRYR
AVAQDAVPTV ERTELPDRAS ASAVLVLDPF LADRVRLVDG TTPGAVPDDA FAVDPADPAT
GDDAVPVDLW MSVDSADEMR WEVGDTRRVT LGSAPWSAGV ADLRLTGTFE ALDPDEPFWQ
HTPSTLFPNV DDNPDTGYHV TARAILDPTS VAALRFATTW TSEAWFPFDV SDLSATNAPA
ALAGLRGLVD TPLPTSEAGG FPAELEWDTQ LVPAIERVLG RSAGLDAVFA LVASGPVGVA
LAVIALTGRL LLDRRRGVLA LALARGASGV QMRSVMALEG LVLGVPAAAI GVAAAALLVP
ADVGAGAYVL PAAVALAPAV TLAGVTNRRS LRPVREDLGT GRAKARGVAE LVLVVLTAAA
VVLLLQRGLV ASAGEAGVDP LIVATPLLLA MCTAVGTMRL YPPLVLGLGR RLRSGRGLVP
SLGAARAARS PVPGLAPALS VVVGVAITVF AALLLPTIRG GAETAALRDV GADLRVSGPV
ITDEQLAAIA SLDGVADVSP VANNGTTQVR EGRGGVAAPV FAVDMEALAR IQADVPGAAP
IPAGSAEWHD GALPAVASSQ LVEDPDADWR LALADPVPLD VVATAPDAVG ITNAPTWLLA
DRALLSEVTN AGLAPRLVLV SLDDGADPAS VEEQVLALVA PTAVATMPAD SLADFDTSPV
VSGMRTGLAL TIAIAGVLAA LACVLTLAIA APARTRLVAV LRTLGLRPRE EVGLVLWEIV
PLLAVSVVAG GVLGVAFGVL LTRVVDLRPF TGGSEQPGIV VDGPLLGLVI GGLLAVVALA
VAVSALVARR RAVGVVLRVG EDT
|
|---|
| |