Gene Bcav_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1551 
Symbol 
ID7859707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1779722 
End bp1780723 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content73% 
IMG OID643865636 
Productbeta-lactamase 
Protein accessionYP_002881569 
Protein GI229820043 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.345066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.407276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA CCGCCGAGAC CCTCGACCCC GTCGCCGCCG ACGCGGCGTT CAGCGGCGTC 
GTCACCGTCC ACACCGGCGA CGAGCGGACG TTCACCCGCG CGTACGGGTT CGCGCACCGC
GCGCTGCAGG TGGCGAACAC CCCCGAGACC CGGTTCGGGA TCGCCAGCGG CGGCAAGACG
TTCACGGCGC TGGCCGTGCT GCGCCTCGTC GACGACGGCG TGTTGCGCCT GGACGACCCC
GTCCGCGGGG TGCTGGGCGA CGACCTCCCG CTGATCGACG ACGCCGTGAC CGTGGAGCAC
CTGCTCGCCC ACACGTCCGG CATCGGCGAC TACCTGGACG AGAGCGCCGA CTGGCAGGCC
GACGACTACG TCCTCACCCG GCCGGTCCAC GAGCTGGACC GCACCGAGGC GTTCCTACCG
ATGCTGGACG GGCACCCGCA GTCCTTCCCT CCCGGCGAGC GCTTCTCATA CTGCAACGGC
GGGTACGTGG TGCTCGCCCT CGTCGCGGAG CGCGCGAGCG GCCAGGGCTA CCACGACCTC
GTCGAGCAGC TCGTCTGCGC TCCCGCCGGC CTGACGCGCA CCGGCTTCCC GCGACTCGAC
GCGCTTCCGG GCGATGTCGC CCTCGGCTAC CTCGACGCCG ACGGCGACCG GTGCAACGTG
CTGCACCTCC CGGTCCGCGC CACGGGCGAC GGCGGGATCG TCACGTCCGC GGACGACCTG
CACACGTTCT GGCTGGCGCT CACCGCGGGG CGGATCGTCC CGCCAGAGCT CGTCGCCGAG
ATGACCCGAC CCCGCCACGA CGTCCCGGAC GAGGGCATGC GCTACGGCCT CGGCCTGTGG
CTGCACGCGA GCGGGCCGCA GCTCGTGCTC GAGGGCTACG ACGCGGGGGC CTCGTTCCGC
TCGACCCACG ATCCGCGCAC GGGCACCACC GTCAGCGTCC TCGGCAACAC CTCCGAGGGC
GCCTGGCCCG TGATCGGGGC CGTCGCGCAC GTCGTCGACT GA
 
Protein sequence
MSLTAETLDP VAADAAFSGV VTVHTGDERT FTRAYGFAHR ALQVANTPET RFGIASGGKT 
FTALAVLRLV DDGVLRLDDP VRGVLGDDLP LIDDAVTVEH LLAHTSGIGD YLDESADWQA
DDYVLTRPVH ELDRTEAFLP MLDGHPQSFP PGERFSYCNG GYVVLALVAE RASGQGYHDL
VEQLVCAPAG LTRTGFPRLD ALPGDVALGY LDADGDRCNV LHLPVRATGD GGIVTSADDL
HTFWLALTAG RIVPPELVAE MTRPRHDVPD EGMRYGLGLW LHASGPQLVL EGYDAGASFR
STHDPRTGTT VSVLGNTSEG AWPVIGAVAH VVD