| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1543 |
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| Symbol | |
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| ID | 7859699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1771597 |
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| End bp | 1773033 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643865628 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002881561 |
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| Protein GI | 229820035 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.793818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0319696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TCGACCGCCG CGCCTTCATG GGCGGACTCG GACTCGCCGG CATGGCCGGC
ATGCTCGCCG CCTGCGGGGG CGAGAGCGCA CCGCCGAACG CCAGCGGAGG CGGCGGGGGC
GGCGCCGACG GGACGCTGCG GTGGTGGGAC CACCTCGGCG GCCTGCAGGA CCTGCACGAT
CAGTGGGCCG CGGACGAGGG CGAGCGCCTC GGCGTCACGA TCGAGCACAC GTACAACGAG
CCGGGCAAGG CCACGGAGGC GCTGCAGCTC GCCAACCAGA GCGACCAGCT GCCGGACGTG
TACACGCCGC TCGTCGGGCT CCCGATGCCC GCGCTGGTGG ACGCCGGCTG GATCCACGAG
ATCACGCTGA GCGACGAGGC GATCGCGCGG CTCCCCGAGG GCAGCTTCGT GGAGGGTCTC
ACGATGCTGG ACGGCAAGAT CTACGGCCTA CCGGCGTTCA CGGACAAGCA GTACGCGGCG
TGCACCTGGT ACAACTCCGC CATCGCCGAG GAGGTCGGCT TCGAGCCCCC CACGAGCTAC
GACGAGTTCC TCGCGGTGCT CCAGGCGATC GCCGACCACG GCGCGTACGC CCCGATGACC
ATGGCGCTCG GCGCCACGGG CCGGATGCGG GAGCAGATCG ACGATCTCGC GCAGGCCGGC
GGCTTCCCGG GCTACCAGGG GCTGCGGTAC GACACCGGCG AGTACGAGTA CCACCACGAC
GCCTACGTGG CCGCGATCGA GCTGTACAAG GAGATCTCGG ACCGGGGGTT CCTGCTCCCG
GGCACGAACA ACTTCCAGAT CCCCGACGCG CGCGGTCGCT GGGCGGCCGG CGAGATCGCC
TTCCACATGG ACGGGCCGTA CTCGCCGGGC GCGGTCCGCT CGCTGAACCC CGACGCCCTG
GAGTTCATGG CGGTGGCCGG GATGCTGACG CCCGAGGGTG ACGAGGTCGT GGCGACGCGC
GGGGCACGCG GTGCGGACTG GGTGGTCGGC GGCACGACGC AGGTGGCCGA GTACGCCAGC
CAGCTGATCG AGACGTTCAC GCAGGAGGAC TACCAGACGG CGCTCGCGTC CGGCATGGAC
CAGCCCCCGA TCGTGCTCGA CACGGTCGCG GGCGCGGACG TCATCGAGCC GTACGCCTGG
CTCGTGGAGG AGTTCCGGAC CCGGATCTTC CGCGGTCCGC AGCCCATCGT CCGCAACGTC
GACGTCGCGA CCGTGCAGGC GAACCAGTCG CCCGTCGCGC CGGAGCTCGG GAACGTCATC
CAGGGCTACC TGGGCGGCGA GATCTCGGAC CTGCGCGCCG CCCTGGTCGA CCTCTCCGAC
GCGAACTCCG CGGCTCTCGA CGACGCGATC GCGACGGCGG TCGACGACGG AGCCGAGGTC
TCCCGGGCCG ACTGGGAGTT CCCGGACTGG GTCCGGGGCC AGGACTACAC CTACTGA
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| Protein sequence | MSTIDRRAFM GGLGLAGMAG MLAACGGESA PPNASGGGGG GADGTLRWWD HLGGLQDLHD
QWAADEGERL GVTIEHTYNE PGKATEALQL ANQSDQLPDV YTPLVGLPMP ALVDAGWIHE
ITLSDEAIAR LPEGSFVEGL TMLDGKIYGL PAFTDKQYAA CTWYNSAIAE EVGFEPPTSY
DEFLAVLQAI ADHGAYAPMT MALGATGRMR EQIDDLAQAG GFPGYQGLRY DTGEYEYHHD
AYVAAIELYK EISDRGFLLP GTNNFQIPDA RGRWAAGEIA FHMDGPYSPG AVRSLNPDAL
EFMAVAGMLT PEGDEVVATR GARGADWVVG GTTQVAEYAS QLIETFTQED YQTALASGMD
QPPIVLDTVA GADVIEPYAW LVEEFRTRIF RGPQPIVRNV DVATVQANQS PVAPELGNVI
QGYLGGEISD LRAALVDLSD ANSAALDDAI ATAVDDGAEV SRADWEFPDW VRGQDYTY
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