Gene Bcav_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1491 
Symbol 
ID7861600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1704617 
End bp1705849 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content74% 
IMG OID643865576 
ProductROK family protein 
Protein accessionYP_002881509 
Protein GI229819983 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC TGAAGCAGGG GACGACGGCG GCACGGGTTT TCGGGGAGAT CTGGCACCAC 
GGGCCGTTGT CGCGCAGCGA GCTGGTCGCG CTGACGGGGC TGACGAAGTC CACGGTGTTC
CAGCTGACTG AGGATCTGCA GCGGGACGGG CTGGTCGTCG AGACCGGGCT GCGCACGAGC
GGCTCGCAGG GTGGCAGGCG GGCGACGCTG CTGCAGGCGA ACCCGGACGC GGTCCGGGTG
GTCGGCGTGC ACCTGGGCGG GACCCGGACG TCCGTGGCGA TCACCGACAC GTTCGGGCGG
GTGCTGGACG CGCGGTCCCG GCCCACGGTG CGCCGCCGTC CGGACGAATC CGTCGCCCGC
GTGGCGGAGA TGATCGGGGA GCTGAGCGCC GAGCACGGGG CGCCCTCCGC CGTCGGCGTG
GCTGTGCCGG GCCTGATCGA CCGGGACACG GGGCTGTGCC TGGTGGCGCC GAACTTGGGC
TGGCGCGACG TGCCGGTGGC CACGCTGATC GGGGAGGCCG TCCAGGCGCC GACGATCGCG
CTGAACACCG TGCAGGCCAT GGCGGTGGCG GAGATGGCGC AGCTGCGGCC CGACGAGCGG
ATGACGCTGG CGATGCTGTA CGTCGGTACG GGGGTCGGCA CAGCCCTCAT CACCGACGGC
AACCTGCTGC GCGGCGCGCG CGGACTCGCC GGCGAGCTCG GGCACCTGCA GGTACGGGAT
CCGGGCGACC CCGAGGCCGT GAAGTGCGCG TGCGGCCGGG TCGGGTGCCT GGAGTCGCTC
GTGGGGGCGG ACGCGATCGT GCGCCGCGCG ACGCAACGGG GGATCGCTGC GGCCGGCCGC
CGGCTCACGC CCGAGCTGGT GGGCGAGCTC GCGTCCGACG GCGATGCGGC GGCCCGGTCC
CTGATCCAGG ACATCGCCGT GGAGATGGGG GAGGCGGCGG CCGCGCTGGT GCAGCTGACG
AACCCTGACA CGGTGGTCGT GGCGGGTTCG GTCGCGTCGA TGGGCGACAT GCTGCTGGAT
CCGCTGCGCG AGACGGTGGT CCGTCGCACG CAGCCCGAGC TGCGGGAGAG TCTCGACGTG
CGGCGCTCGC TGCTCGACAA CCAGGGCAAG CTGCGGGGCG CCATCACGCT GGCGCTGCAG
GCGCTGGGGG TGCCGGTGCG GGGGTTGTCA GGGTCGGCGT GGCGGAGCCA GGTGCTGCCC
GTGGGGGAGG CGGCCGTCGC CGCGGGCGAT TGA
 
Protein sequence
MAQLKQGTTA ARVFGEIWHH GPLSRSELVA LTGLTKSTVF QLTEDLQRDG LVVETGLRTS 
GSQGGRRATL LQANPDAVRV VGVHLGGTRT SVAITDTFGR VLDARSRPTV RRRPDESVAR
VAEMIGELSA EHGAPSAVGV AVPGLIDRDT GLCLVAPNLG WRDVPVATLI GEAVQAPTIA
LNTVQAMAVA EMAQLRPDER MTLAMLYVGT GVGTALITDG NLLRGARGLA GELGHLQVRD
PGDPEAVKCA CGRVGCLESL VGADAIVRRA TQRGIAAAGR RLTPELVGEL ASDGDAAARS
LIQDIAVEMG EAAAALVQLT NPDTVVVAGS VASMGDMLLD PLRETVVRRT QPELRESLDV
RRSLLDNQGK LRGAITLALQ ALGVPVRGLS GSAWRSQVLP VGEAAVAAGD