| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1461 |
|---|
| Symbol | |
|---|
| ID | 7860930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1667046 |
|---|
| End bp | 1668797 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643865548 |
|---|
| Product | 5'-Nucleotidase domain protein |
|---|
| Protein accession | YP_002881481 |
|---|
| Protein GI | 229819955 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.899956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCT CACGCAGTGT GACTGTCGTG GCAGCCCTGG CCGGCCTGGC GCTCCTGGCC
GGCCCGGGGG CTGCCAAGGC GGGTGACCGG CCCCCGATCG ATGTGCAGGT CCTCGCGATC
AGTGACTTTC ACGGCTACCT CTCCCCGCCT GCCGACGCCG CGAACGGCTC GATCGAGGCG
CCCGGGGGCG GACGGCTCAC GGTCGGCGGT GCCGCCTACC TCGCCACGCA TCTGGACGCG
GCGGCCGCGG GCCGGCCGAA CTCGATCCGG GTCGCCAACG GTGACAGCTT CACCGGGTGG
CAGTGGGAGG TCACGATGGC GCGGGACGAG CCGACGATCG AGCTGCTGGA CCATCTCGGG
ATCGAGGCCT CGGCGGTGGG GAACCACGAG CTGGACGTCT CGCTGGAGTT CCTGCGCGAC
CACGTGATGG GAGGCGAGTG CTTCGGGCGA GTCGGCGTCG ACATGTGCTT CGAGCGGTCC
GACGGCGCGC CGTTCTCGGC GGTCGACTTC CCGTTCCTCG CGGCGAACCT CCATGACGCC
AGCTCGGGGG ACCGGCCGTT CGCGAGCACC TACGTGCGCG ACGTCGTCGG GCCGGGGAAC
CAGGTCGCTC AGGTGGGCTT CATCGGGGTG ACGACGCCGG CCGTCGAGCG GATCTTCGCC
TCTTACCAGG TGGGTCGCCT CGTCGCCGAG GAGATGACTC AGGCGGTCGA CGAGGCGGCG
GCGGAGCTGC ACCGTGACGG GGTGGACGCC ATCGTCGTCC TCGCCCACGA CGGTGCTGAG
ACCTCCGGGA CGTACGACGA GTGCGGGGAC GCGACGGGGC CGGTCGTCGA CCTGGCCCGC
GAGGCGTCGC CACTGGTGGA CGTCGTCGTC GGCGGGCACT GGCACACGGC GTTCAGCTGT
AGCGTGACCG ATCCGGCGGG TCGGCCTCGG GCGGTCGTGT CGCCGGGCCA CCACGGCCAG
GTCTTCGCCG ACCTCTCATT CCGGGTGAAC CCCGGCACGG GAGAGATCGT GCGCGAGAGC
GTCAGCGCCG TGAACGTCCC CGTGACGCGC AACGTCACGC CGGATCCGGA GGTGGCGGAC
CTGGTCGAGC ACTGGGTCGG CACTGGTGGG GAGCTGTGGG CGCGACCGCT GGCGACGGTG
ACTGAGAACA TCCCGAACGT CCCGGATGCT CTCGGTCAGA GCCCGGCTCG GAACCTGGTG
GCGGACGCCT ACCGTGACAT CGGTTCAAGC CTCGGTGAGC CGGCGGACCT GGCACTTGTC
GAGCCCTACC AGGTGCGCAA CGGCGTGTCG TACGCGCGCG GTACGAATCC TCAGGACGCC
GACGGCACCG TGCTGTACGG CGAGGGTTGG GTGGTCCAGG GCCGCGCCTC GTCAGTGGTC
ACGCTCGAGA TCACGGGTGC CGACCTGCTG GACGCCCTCG AGCAGCAGTG GCGGGAGGAC
CCCGACGTCT CATATCTGCC GCTTTCACTC TCGGCTGGGG CACGCCTGAC GATCGACGCC
GAGCGAGACG CCGGCTCCCG CGTCGTGGAG CTCATGCTCG ACGGCGTCCC GATCGATCAG
GCGGCGCGCT ACCGGGTGGC GATGTCCTCG CGGCTCGCCC TCGGGATGGA CGGCTTCACG
GTCCTTGCCA GCGGCACGGA CCCGGTGCGC TCGGACATGG ACTACTTCGC ATTCACAGCC
TGGATGGAGA GCCAGGGCAC GTTGAGCGCT CCGGCGACCG ATCGCGTCGT CGAGCTCTCG
GGTGGGGCCT GA
|
|---|
| Protein sequence | MPISRSVTVV AALAGLALLA GPGAAKAGDR PPIDVQVLAI SDFHGYLSPP ADAANGSIEA
PGGGRLTVGG AAYLATHLDA AAAGRPNSIR VANGDSFTGW QWEVTMARDE PTIELLDHLG
IEASAVGNHE LDVSLEFLRD HVMGGECFGR VGVDMCFERS DGAPFSAVDF PFLAANLHDA
SSGDRPFAST YVRDVVGPGN QVAQVGFIGV TTPAVERIFA SYQVGRLVAE EMTQAVDEAA
AELHRDGVDA IVVLAHDGAE TSGTYDECGD ATGPVVDLAR EASPLVDVVV GGHWHTAFSC
SVTDPAGRPR AVVSPGHHGQ VFADLSFRVN PGTGEIVRES VSAVNVPVTR NVTPDPEVAD
LVEHWVGTGG ELWARPLATV TENIPNVPDA LGQSPARNLV ADAYRDIGSS LGEPADLALV
EPYQVRNGVS YARGTNPQDA DGTVLYGEGW VVQGRASSVV TLEITGADLL DALEQQWRED
PDVSYLPLSL SAGARLTIDA ERDAGSRVVE LMLDGVPIDQ AARYRVAMSS RLALGMDGFT
VLASGTDPVR SDMDYFAFTA WMESQGTLSA PATDRVVELS GGA
|
|---|
| |