Gene Bcav_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1432 
Symbol 
ID7860901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1633243 
End bp1633929 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content78% 
IMG OID643865519 
Productpentapeptide repeat protein 
Protein accessionYP_002881452 
Protein GI229819926 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAG GACACCCGCC GCTGCGCGCC GTCGCCGACT CGCTCGCCCC GCGCCCGGCG 
GCCCCCGCCG CCGTGCTCGC TCCCGCTCGG CCGGACGGCG ACGCGACGCT CGACGGCGCG
GACCTGCGCC GCGCCGACCT CGGCACCCTC GACGACGTCG CGATCCTGGC GAGCCGCCTC
GACGGCGTAC GCGCACCGGG CGCCGACTGG CGCGGGGTGA ACCTCACCGA GTGCACGCTC
GACGCCGTCG ACCTCGCCGG CGCGCGGCTC GAGGACGTCG GGCTGGCGGC GTCGTCGGTC
GCCGACGCCC GGCTCACGGG CGCGACATGG CTCCGCGCCG CGTGGCGCGA CGTCGCCGTT
CGTGGCGGCG TCGCCGCGAC CATGACGTTC GCCCAGTCGC GCCTGCGGCG CGTGCGGTTC
GAGGGCGTCG ACGCGTCGGG GCTCGAGCTC ATCGACACGG AGCTGACCGA GGTCGCGTTC
GTGGACTGCG ACCTGCGCGG TGCCCGCCTG GGCGGCGCGC GCGTGCGCTC CGACGTCGTC
GTCGTCGGCT GCGACCTCGA CGGCGCGACC GGCCTGGCGG CCCTGCGCGG CGCCCAGCTG
GGCCACGGCG ACGCCGTGAG CGGGCTCGCG TCCATGGCGG CCGAGCTGGG CATCCGCATC
GGCGACGACC TCGAGGTGCA GCGATGA
 
Protein sequence
MPRGHPPLRA VADSLAPRPA APAAVLAPAR PDGDATLDGA DLRRADLGTL DDVAILASRL 
DGVRAPGADW RGVNLTECTL DAVDLAGARL EDVGLAASSV ADARLTGATW LRAAWRDVAV
RGGVAATMTF AQSRLRRVRF EGVDASGLEL IDTELTEVAF VDCDLRGARL GGARVRSDVV
VVGCDLDGAT GLAALRGAQL GHGDAVSGLA SMAAELGIRI GDDLEVQR