Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1382 |
Symbol | |
ID | 7861682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1575560 |
End bp | 1576285 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865466 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002881403 |
Protein GI | 229819877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0100297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGT CCCGGGCGTA CCGCAGCCCC GTCCGCGACG CGCAGGCGCG CCTCACGGAA CAGCGGGTCC TCGACACCGC CGAGGACCTC TTCCTCTCCC GCGGGTACAC CGCCACGTCC GTCGCGCAGG TCGCCCGGGG CGCCGGAGTC TCGCCACAGA CCGTGTACAA CGTGTTCGGC TCGAAGGTCG AGGTCCTCGC ACGGCTCTAC ACGCGCCGCG TCCTCGGTGG CGACCCGACC CCGCCCCTGG AGCGGCCGGA GATCCGGGCG CTCGACGCCG AGACGGACGC CGCGTGGATC GTGCGCGCGT ACGTGAGCCT CAGCCGCGAG CTCGCGGAGC GCGTCGGACC GCTCGAGACC GTCGTGGCCG CCGCCGCGGC CGGCGATGCG GACGTCGCGG CGCGCGTGGG CGGCCTCGGC GCCGAGCGCC TCCTCGGCGC GGAGCTGCTC GTGCGGCGGC TGCGACAGCT CGACGCGCTG CGGCCCGGGC TCGGCGACGA CGAGGCGCGC GACAGGCTGT GGACGCTCTC GGGATCCGCT GTCTGGCGGA TGCTCACGCG CGAACGCGGC TGGAGCACCG AGGCGTACGA GACGTGGCTG ACCGAGGTGC TGAGCCAGGC GGTGCTGGCG GACCCGGACG CCGTGGCCGT GCCGCCGTGG GAGCGCGGCG GAGAGGCGGT CCGGCAGGCT GCGGACGCGA CGGATCCGCG CACGCGGACG ACCTAG
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Protein sequence | MTTSRAYRSP VRDAQARLTE QRVLDTAEDL FLSRGYTATS VAQVARGAGV SPQTVYNVFG SKVEVLARLY TRRVLGGDPT PPLERPEIRA LDAETDAAWI VRAYVSLSRE LAERVGPLET VVAAAAAGDA DVAARVGGLG AERLLGAELL VRRLRQLDAL RPGLGDDEAR DRLWTLSGSA VWRMLTRERG WSTEAYETWL TEVLSQAVLA DPDAVAVPPW ERGGEAVRQA ADATDPRTRT T
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