Gene Bcav_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1361 
Symbol 
ID7861661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1555106 
End bp1556329 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content79% 
IMG OID643865445 
Productaminotransferase class V 
Protein accessionYP_002881382 
Protein GI229819856 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.247137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGC AGACCTACCT GGACCACGCG GCGACGACGC CGGTGCTCCC GGAGGCGATC 
GCGGCGTTCG CCGAGGAGGC GGCGCGGCTC GGCAACCCGT CGTCGACGCA CGGGCACGGC
CGGGCGGCCC GGGCGAGCCT CGAGACATCG CGCGAGCGCA TCGCCGCGGC GCTGGACGCC
GACCCGGCCG AGGTCCTCTT CACGGCGGGG GGCTCCGAGG CGGACACCCT CGCCGTCACG
GGTGCCTACC TGGCGCGCGC GGAGGCGAAC CGCACACGCG TGGCGATCTC CGCCGTCGAG
CACGCGGCGG TGATCGAGGC GGCGCACGAC CTCGCCCGGC GGCACGGGGC CGCCGTCGTG
AAGCTGCCGG TGGACGGCGC GGGGGTGCTC CGCCTCGACG CCCTCGGCGC GGAGCTCGAC
GCGCACGCCG ACGCGCTCGC GCTCGTGTCG GTGATGTGGG CGAACAACGA GGTCGGCGCC
CTGCAGCCGG TCGACGGCGT CGTGGCGGCC GTGCGGGCGG CGTGCGGTGG CGCCGTCGCC
GTCCACTCCG ACGCCGTCCA GGCCGTCGGG CACGTCCCCG TGACGTTCGT GGGCTCCGGG
CTCGACGCGC TCACCCTGTC CGGCCACAAG CTCGGCGCCC CGGCGGGCAT CGGGGCGCTC
CTCGCCCGGC GCTCACTGGC GTTGGCGCCG GTGATCGCCG GCGGCGGTCA GGAGCGCGGT
GTGCGCTCGG GCACCGTCCC GGTGGCGCTC GCGGCCGCGC TCGCCGTCGC CGTCGAGACG
GCCGTGCGCG ACGTCGACGG CGAGCGCCGG CGGCTCGGCG CGCTGCGGGA CCGGCTCGCG
GCCGGCGCGC TGGCTGCCGT GCTCGACGCG CGCCTCGACG GACCGGACGG CGACGCCCGC
CTTCCCGGGC ACGTCCACCT GACGATCCCC GGCGTCGACG TCGACGCGCT GCTCTTCGGG
CTCGACTCGG CCGGCGTCTC GGCGTCCGCG GGATCGGCGT GCCACGCGGG GGTGACCCAG
GCCTCGCACG TGATGCTCGC GATGGGGGCG TCGCCGGCGG ACGCCCGGAG CGTGCTGCGA
CTGACGCTGG GGCGGACGTC GACGGATGCC GACGTCGACG CGGTGCTCGC AGTGCTCCCG
GGGGCCGCCG AGCGTGCCCG CGCCGCGGGA CTCGTGGCGG CCCGCGCCCG CGGCCCGGCT
CCTACGCCTC GCCGGAGCGG GTGA
 
Protein sequence
MRPQTYLDHA ATTPVLPEAI AAFAEEAARL GNPSSTHGHG RAARASLETS RERIAAALDA 
DPAEVLFTAG GSEADTLAVT GAYLARAEAN RTRVAISAVE HAAVIEAAHD LARRHGAAVV
KLPVDGAGVL RLDALGAELD AHADALALVS VMWANNEVGA LQPVDGVVAA VRAACGGAVA
VHSDAVQAVG HVPVTFVGSG LDALTLSGHK LGAPAGIGAL LARRSLALAP VIAGGGQERG
VRSGTVPVAL AAALAVAVET AVRDVDGERR RLGALRDRLA AGALAAVLDA RLDGPDGDAR
LPGHVHLTIP GVDVDALLFG LDSAGVSASA GSACHAGVTQ ASHVMLAMGA SPADARSVLR
LTLGRTSTDA DVDAVLAVLP GAAERARAAG LVAARARGPA PTPRRSG