Gene Bcav_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1287 
Symbol 
ID7858750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1463554 
End bp1464444 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content76% 
IMG OID643865372 
Productmodification methylase, HemK family 
Protein accessionYP_002881309 
Protein GI229819783 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.890968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.356923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCT CCGGCGACCG GCCCGCTGCC TGGCTCCGGT GGGGCACGGC CGAGCTCGAC 
GCGGCCGGCG TGCCCAGTCC GCGTGCGGAC GCCGAGACCC TGCTCGCCTC CGCGCTCGGC
GTCACGCGTG CCGAGGTCCG GCGACTCGTC GTCCTCGACG CCGACCTACC CGAGGGCCGG
CGCGCCGACT TTGCGCGCCT CGTGGATCGC CGCGCCGCGC GCGAGCCGCT CCAGCACATC
CTCGGTGCCG CGCCGTTCCG GCACCTCGAG CTCGCCGTCG GACCCGGCGT CTTCGTGCCG
CGGCCCGAGA CCGAGGTCGT GGCTCAGGTG GCCATCGACG AGGCGGAGCG GCTGGCCGTC
GACGACGCCC GGCCGCTCGT CGTGGACCTG TGCTGCGGTG CGGGCGGGAT CGCGCTCGCC
GTCGACACCG AGGTCCCCGC CTCCCGTGTG GTCGCCGTGG ACCTCGCGCC CGAGGCCGTC
GCTCTGACCC GGCGCAACGA CGCCGCCGTC GGCACCCGCA CCATGCGGAT CGAGCACGGT
GACGTCCGCG ACTCGGAGCT GCTCGCGGAC CTCGACGGCA CGGTCGACGT CGTCGTCAGC
AACCCGCCGT ACATCCCGCC GGACGCGGAG CCCACGGAGC CGGAGGTCCG CGACCACGAC
CCCGATCTCG CGCTGTACGG CGGGGGAGTC GACGGCCTCG ACGTGCCGCG AGCCGTCGTG
CTCGCCTCGA CCCGCCTGCT GCGCGCGGGC GGGCTGTTCG TGATGGAGCA TGCCGAGGTG
CAGGCGGCGG CCGTGCGGGA GGTGGTCACG GCGAGCGGAG CCTTCGACGA CGCCGTGACG
CTCGACGACC TCACCGGACG TCCGCGGGCG GTCGTGGCCC GGCGACGCTG A
 
Protein sequence
MSASGDRPAA WLRWGTAELD AAGVPSPRAD AETLLASALG VTRAEVRRLV VLDADLPEGR 
RADFARLVDR RAAREPLQHI LGAAPFRHLE LAVGPGVFVP RPETEVVAQV AIDEAERLAV
DDARPLVVDL CCGAGGIALA VDTEVPASRV VAVDLAPEAV ALTRRNDAAV GTRTMRIEHG
DVRDSELLAD LDGTVDVVVS NPPYIPPDAE PTEPEVRDHD PDLALYGGGV DGLDVPRAVV
LASTRLLRAG GLFVMEHAEV QAAAVREVVT ASGAFDDAVT LDDLTGRPRA VVARRR