Gene Bcav_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1277 
Symbol 
ID7858739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1451001 
End bp1452296 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content74% 
IMG OID643865361 
ProductPeptidase M23 
Protein accessionYP_002881299 
Protein GI229819773 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.376949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.138008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCACG AGCGCGCTGA GTCGTCCGCG CAGACGGCGG ACACGCGACG CGCCCGACGA 
GCCGCAGAAC GCGCGGTGAC GTCCGGCGAG CCGGAGGCGA CGACCCTCAC GCGGCGTCAG
CTCCGCGAGG CGGCGCTCGC CGTCGAGAAC GCGCAGCGGG AGGCCGATCT CGTCGCCGAG
TTCGAGCGCC TCCTCGCCGC CCAGCGCGCC GCGCGCGTGG GCGACGGCGT CGGTGTGGCG
TTCGCGACGC TTCCGCTGCC TGCTCAGGCG GAGCCGGCCG GCAGCGTGAC CGCTGTGTCC
GCTCCGGCCC TCGCCGTCGC GCCGGACGTC GAGGACACGG CAGCGATGCT CGCGATCCTC
GACGCGCCCG ACGGGGCGCC GCCCGCGCGC CCATCCGTGG ACGATGTGCC CGAGGCGGAG
CACCAGCCGG CGATGGCGCT CGTTCCGCCG GCCGGCCTCG GATTCGACTG GCCGGACCCG
CGGCCGGCGC GTACCCCGAG CGCCAAGGGT CGGCACTGGG TGCCGCGGCT CGCGGTGCTC
TCCGCGCTCG GGGCGGCGAC GATCGTGATC CCCGTCACGG CGACCTCGCA GGCGCAGACC
CCGAACATCC CCGTGCCACA GGCGACGTCG AGCGCCCTCG ACACGCTCGC GACGGCGTCG
GCGTCCTCGC TCGCCGCGGC AGCGACGCCC GACGAGCCGA GCGCGGACTC CACGCTCGGC
GCCGATCAGC TCGCCCAGGC CCGCGCCGTC GTCAGCGCCA GCAGGTCCGC GGGCCGCGGG
GAGGTCGTGT GCTCGGCCAC CGGGACTGAA GGGAACGGCG CGCTCGCAGC GATCGACGCG
GCCGCCGTCG TCGACGTCGT GATGCCACTG CAGGACGGGA CGTACCGCGT CACGTCGCAG
TTCGGCTACC GCTGGGGCGG GACGCACGAG GGCGTCGACT ACGCGGCGCC GTCGGGTACT
CCCATCCATG CGGTCGCGGG CGGTGAGGTC ATCTACACCG GCGGCGGCAA GGAAGGGCGC
AGCGGGCAGC TCGTCATCAT CGAGCACGAC TTCGACGGGC AGAAGGTGTG GAGCTGGTAC
GTCCACATGT ACCCGAGCGG CGTCTACGTC AGCGAGGGCG ACCAGGTGCT CGCGGGTGAT
GTCATCGGTG CCGTCGGCTC GTACGGCAAC TCGACCGGCC CGCACCTGCA CCTCGAGATC
CACGTCGACG ACGAGCTGTC CACCGTCGAC CCGCCGAGCT GGCTCGCCGA GCACGACGCG
ATGACGATGA CGACCTCCGG GTCGCTCTGC TCCTGA
 
Protein sequence
MSHERAESSA QTADTRRARR AAERAVTSGE PEATTLTRRQ LREAALAVEN AQREADLVAE 
FERLLAAQRA ARVGDGVGVA FATLPLPAQA EPAGSVTAVS APALAVAPDV EDTAAMLAIL
DAPDGAPPAR PSVDDVPEAE HQPAMALVPP AGLGFDWPDP RPARTPSAKG RHWVPRLAVL
SALGAATIVI PVTATSQAQT PNIPVPQATS SALDTLATAS ASSLAAAATP DEPSADSTLG
ADQLAQARAV VSASRSAGRG EVVCSATGTE GNGALAAIDA AAVVDVVMPL QDGTYRVTSQ
FGYRWGGTHE GVDYAAPSGT PIHAVAGGEV IYTGGGKEGR SGQLVIIEHD FDGQKVWSWY
VHMYPSGVYV SEGDQVLAGD VIGAVGSYGN STGPHLHLEI HVDDELSTVD PPSWLAEHDA
MTMTTSGSLC S