Gene Bcav_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1250 
Symbol 
ID7859561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1418126 
End bp1421248 
Gene Length3123 bp 
Protein Length1040 aa 
Translation table11 
GC content71% 
IMG OID643865334 
ProductATPase 
Protein accessionYP_002881272 
Protein GI229819746 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.515643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA CCGTGTCCAT CGTCCGTCCG GACGCTCTGG ACTACCTGTC CGGCTTGACG 
CTCGATCCGA CGATGCTGCC CCCCGACAGC GCCTGGCCGC TGGTCCCGCT CACGTCTCGT
CGGCTCATCC GGATACGGGG CGTCGGCGTG ACCCCGCTCC CGACGGGTTC CCCGCCGTCG
ACCGCTCTCG GGAGCGAGGC TCTGCTCGCG GGACTCGCCG CGGAGGGCGT TCCGGTGGCC
TTCCAGGTGC GCGGCCTTCC GGACGGGGTC TCGATCGACA TCGGGACGTG GGACGGTCCC
CGACTCCACC CGGACCGTGC GGAAGGGCTC CTGGTGTCCC TTCTCGAGAG CACCTACGCC
GCGGTGACCT CCGAGCCAGG CCCGCTCGAC CCGCTGGGCG TCTCGGACGG GACGACAGGG
GCCATCGTCG TCGGCGTGCC GCACGGCGCC GTCGAACGCG AGGAGGCGCC CTGGGATCGT
CTCGCCCGCG CTCTGCGTGG ACTGCGGTAC GTGGCGCTCG TCCTTGCGGA GCCGGTCCCT
CGAGAGACGG TCACCCGGTA CCGCGACTCC GCGTACGAGG ACCTCCGCCT CGCTCTCGCG
GCACAGCACC AGCGCTCTGA CCAGCCACTG ACACAGGCAT ACGTGGACAG GCTCACGGCC
CTCGTCCAGA TGCTCGACCG GGCGGTGGCG ACCGGGGCGT GGCGGACTGG CACCTACCTC
CTCGCACCGT GGCTGACGCT CCCGCGCGTC ACAGCGGCGT GGCAAGGCGT GCTGGCAGGA
GTCGACAAGC AGATCGCGCC GCTACGCTCG TTCGCGACGG AGAAGGCAGG GGACCTCGCG
GCCGGGTGGT CCCTCCCGAA CACGCCCGGT CCGCCGGGTC CGCGCGCCTG GAGTCAGCCG
TATCTGCACC AGACGCTCCT CGACTCTCGC GCCCTCGCCT CGGTCGTGCA CCTCCCGCGT
CGGGAGACAT CCGGATTCAC GGTTCGTCCG GCACCCTCGT TCGGCGCGAT GCGCGCGACG
CCGGCTCAGG ACCGCCTGGT GCCCGTCGGC GCGATCCTCG CGGACGGGCG TCCCACCGGG
GACCAGTACG TGATCGGCGT CGACGACCTC TCACGCCACG TGTTCGTCGC TGGCCTCACG
GGCTCGGGAA AGACGCACAC CGTGAAGCAT GTTCTTGCGG AGCTCGCCGC GCTCGACGTG
CCCTTCCTCG TGATCGAGCC CGCGAAGACG GAGTACCGGG ATCTCCTCGG TCGTGGCCAG
CTCGCCGAGC GACTCCGGGT GTACACGCCC GGACGCGAGA ACGTCGCGCC GCTGCGCCTC
AACCCGTTCG AGGTTCCACC CGGAACCGAC GTCTCCACCC ACCTCGACCT CCTCAAGGCT
GTTTTCCAGG CCAGCATGGC GATGTGGGTC CCGCTCCCCC ACGTGCTGGA GCAATGCCTC
GTCGAGCTGT ACACCGAGCA CGGCTGGGAC TTCACGACTG GACGGCGCGA CGGCGGAGCT
CCGGCCACCG GGTCGGACGT GCCGACTCTG GGAGAGCTGG TCGCCGCGGT TCAGCGCACC
GTGCCCCAGC TCGGCTACAA GGGCGAGACG GCGCAGGACA TCACGGGCTC CTTGGTCACG
CGGCTCTCCG CCCTGCGTCG GGGCACCCGC GGCCTGATGT TCGACGTCGA GCGTTCGGTA
CCGACGAGCG ATCTCCTCGC CCACCCGACG ATCGTGGAGC TCGAAGGGCT GGGAGACGAC
GGCGACAAGG CGTTCGCGAT GGGCCTGCTG CTCATCCGGC TCTACGAGCA CCGCCGCGCC
GAGGCGGCCG CCACGCTCGC GCAGGCTGCG CGGCAGGGCG ACCCGCCGCC TGCCCGCCGG
GGCCTCGAGC ACCTCGTGGT CGTCGAGGAG GCGCACCGCC TGCTCGCGAA GTCCGAGGGC
GGCAGCGAGT ACCGAGCCGA TCCGCAGGGC GCGTTCGCGG ACACGTTCTC GCAGATGCTC
TCGGAGATCC GCGCCTACGG CCAGGGCATC GTCATCGCGG ACCAGGTTCC GGTCAGGCTC
GCGCCGGACG TGGTGAAGAA CACGAACCTC AAGGTCGTGC ACCGCCTCGT CGCCGGTGAC
GACCGGGACG TCATGGCCGC CGCGATGGCG ATGAGCCCCG CCCAGTCCGA GCATCTTGCC
GTCCTCGGCA TGGGACGCGC CGCCGTCTTC AGCGAGGGTG ATCACACGCC GGTGATCGTG
GCCGTGGCAC CGCCGTCGAC CATCGGACCG CCCGGCCGAT CGATCGACGA CAACGCGGTC
GCCTCCGTCA TGAGCGAACG CGCACCCGAC CTCCGGCGCG CATCGGTGTG CGACGGAGTG
TGCAGCGGCG CCGCAGAGTG CCTCGAGGTT CGGCGACTCG GTGAGCGTCC CGATGCCCGA
CTCCTGGCCG GACGGGTCCT CGCCACCGCC ACGGTGCATC CGTCCGGCCT CGATGTGGTC
TGGCCGGACG TCGTCGCGTA CGTCGGAGCG GGCGCTCCTA GCGACGTGAA TCTCGCACAT
CGGGTGCACG CGTTCGCCTG GCACGCGTTG AGAACGGCGG TCTCCAGGAG GGCGCTGCAG
GGTCGGTGGC CGGCCGACGA CGTAGACGTC CTCTGGTCCC ACCTGCGTCA GGCTCTCGCC
GAGCGGGCGA CCGCCCGCGG CCAGTGGCAG GAGGCGACCA CGGCGCGCGA GCAGGTCGTC
GCCGTCGGAA CCCGGCTGCA GAGCCGCACG AGCGATCCCC TCCCGCTGTG CCGCGAGGTC
TGCAAGGACA GCACGTGTCG CTTCCGCGAC CCGCTCCTCG ACGTGCTCAC CCATCCGTCC
TTCCAGGATC ACGCGGCGAG AGCTGCGGCG GTCACGGGAT CGGACCTCAT TGAGGTCGCG
TCCGCGGTCT CCCACCAGGT GCTTGACCTC GAGGGCGGCG ACCTGCCCCA GGACACGCCA
GCGTTGGTCA GCGCCGGCTG GAGCGCGCTG GCGTGCGCCG GCCAGATCAT GCGTTGCCGC
GGGCCACGGG CCAAACAGGG CGCACGTGCC GTCGCTGAGG GCCTTCTCGA GCGCAACTGG
GAGCTGAGCA TCGACGCTCT CGACGGACAG CAGGTACCGA CGAGCACGGG AGGAACGACA
TGA
 
Protein sequence
MSATVSIVRP DALDYLSGLT LDPTMLPPDS AWPLVPLTSR RLIRIRGVGV TPLPTGSPPS 
TALGSEALLA GLAAEGVPVA FQVRGLPDGV SIDIGTWDGP RLHPDRAEGL LVSLLESTYA
AVTSEPGPLD PLGVSDGTTG AIVVGVPHGA VEREEAPWDR LARALRGLRY VALVLAEPVP
RETVTRYRDS AYEDLRLALA AQHQRSDQPL TQAYVDRLTA LVQMLDRAVA TGAWRTGTYL
LAPWLTLPRV TAAWQGVLAG VDKQIAPLRS FATEKAGDLA AGWSLPNTPG PPGPRAWSQP
YLHQTLLDSR ALASVVHLPR RETSGFTVRP APSFGAMRAT PAQDRLVPVG AILADGRPTG
DQYVIGVDDL SRHVFVAGLT GSGKTHTVKH VLAELAALDV PFLVIEPAKT EYRDLLGRGQ
LAERLRVYTP GRENVAPLRL NPFEVPPGTD VSTHLDLLKA VFQASMAMWV PLPHVLEQCL
VELYTEHGWD FTTGRRDGGA PATGSDVPTL GELVAAVQRT VPQLGYKGET AQDITGSLVT
RLSALRRGTR GLMFDVERSV PTSDLLAHPT IVELEGLGDD GDKAFAMGLL LIRLYEHRRA
EAAATLAQAA RQGDPPPARR GLEHLVVVEE AHRLLAKSEG GSEYRADPQG AFADTFSQML
SEIRAYGQGI VIADQVPVRL APDVVKNTNL KVVHRLVAGD DRDVMAAAMA MSPAQSEHLA
VLGMGRAAVF SEGDHTPVIV AVAPPSTIGP PGRSIDDNAV ASVMSERAPD LRRASVCDGV
CSGAAECLEV RRLGERPDAR LLAGRVLATA TVHPSGLDVV WPDVVAYVGA GAPSDVNLAH
RVHAFAWHAL RTAVSRRALQ GRWPADDVDV LWSHLRQALA ERATARGQWQ EATTAREQVV
AVGTRLQSRT SDPLPLCREV CKDSTCRFRD PLLDVLTHPS FQDHAARAAA VTGSDLIEVA
SAVSHQVLDL EGGDLPQDTP ALVSAGWSAL ACAGQIMRCR GPRAKQGARA VAEGLLERNW
ELSIDALDGQ QVPTSTGGTT