Gene Bcav_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1171 
Symbol 
ID7860630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1318068 
End bp1319255 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID643865255 
ProductUDP-galactopyranose mutase 
Protein accessionYP_002881193 
Protein GI229819667 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0707003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.958151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGG ACCTCGTCGT CGTCGGGTCG GGCTTCTACG GCCTGACGAT CGCGGAACGG 
TGCGCCGTCG AGCACGGCAT CAAGGTGCTC GTCGTCGACC GGCGGCCCCA CATCGGCGGC
AACGCGTTCA GCGAGCGCGA GCGCACCACC GGCATCGAGG TCCACCGGTA CGGGGCGCAC
CTGTTCCACA CCTCGAACGA GCGGGTGTGG GACTACGTCA ACCGGTTCAC CGCGTTCACG
AGCTACGTCC ACCACGTGTA CACGACGTAC CGCGGCGAGG TATACCCGAT GCCGATCAAC
CTCGGCACGG TGAACCAGTT CTTCCGCTCC GCCTACACGC CGGACGAGGC GCGCGCGCTC
GTCGCTGAGC AGTCCACGGA GATCTCCGGG CACGAGGTGA GCAACCTCGA GGAGAAGGGG
ATCTCGCTCA TCGGGCGGCC GCTCTACGAG GCGTTCATCC GCGGGTACAC GGCGAAGCAG
TGGCAGACGG ACCCGAAGGA CCTGCCCGCG GAGATCATCT CCCGCCTGCC GGTCCGGTAC
ACGTACGACA ACCGGTACTT CAACGACACG TACGAGGGTC TGCCGCGCGA CGGCTACACG
GCGTGGCTGG AGCGGATGGC GGACCACCCG AACATCGAGG TCCGCCTCGA CACCGACTTC
TTCGACTCCT CGCAGCCGAT CAACTCCCGC GACGTCGTCG GCCAGGTCCC GGTCGTCTAC
ACGGGCCCGG TGGACCGGTA CTTCGAGTAC GCGGAGGGTG AGCTGTCCTG GCGGACGCTC
GACTTCACCG AGGAGGTCCT CGACGTCGGC GACTACCAGG GGACGTCGGT GATGAACTAC
GCCGACGAGG ACGTGCCGTA CACCCGCATC CACGAGTTCC GGCACTTCCA CCCGGAGCGC
GACTACCCGA CGGACCGCAC CGTGATCATG CGCGAGTACT CGCGGTTCGC GACGCGTGAG
GACGAGCCGT ACTACCCCGT GAACACGCCC GAGGACCGCG CGCGGCTGCT CGCCTACCGG
GACCTCGCGA AGGGCGAGGA CGGCGTGCTG TTCGGCGGGC GCCTCGGCAC GTACAAGTAC
CTCGACATGC ACATGGCCAT CGGCTCCGCG CTCAGCGCGT TCGACAACAA GCTCACGCCG
TTCCTGCGCG GGTCGCAGAA GCTGGTCAGC GGCGGCGTCG CCGACTGA
 
Protein sequence
MNADLVVVGS GFYGLTIAER CAVEHGIKVL VVDRRPHIGG NAFSERERTT GIEVHRYGAH 
LFHTSNERVW DYVNRFTAFT SYVHHVYTTY RGEVYPMPIN LGTVNQFFRS AYTPDEARAL
VAEQSTEISG HEVSNLEEKG ISLIGRPLYE AFIRGYTAKQ WQTDPKDLPA EIISRLPVRY
TYDNRYFNDT YEGLPRDGYT AWLERMADHP NIEVRLDTDF FDSSQPINSR DVVGQVPVVY
TGPVDRYFEY AEGELSWRTL DFTEEVLDVG DYQGTSVMNY ADEDVPYTRI HEFRHFHPER
DYPTDRTVIM REYSRFATRE DEPYYPVNTP EDRARLLAYR DLAKGEDGVL FGGRLGTYKY
LDMHMAIGSA LSAFDNKLTP FLRGSQKLVS GGVAD