Gene Bcav_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1163 
Symbol 
ID7860622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1306631 
End bp1308064 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content74% 
IMG OID643865247 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002881185 
Protein GI229819659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTT CCCTCACCCG CCTGTCCCGT CCGCCGCTCG CCGACCCGCT CGGCGCTGTC 
CCGGCTCCTG TCCCCGCCGT CAGCGCCCTC GGTACCGACG AGCCGACCGC GCGGCGCCGG
GTCGCCGTCG TCGGCACCGG CTATCTCGGT GCCACGCACG CCGCGGCGAT GGCCTCGCTC
GGCTTCGACG TCGTCGGGGT CGACACCGAC GAGAACAAGG TGCGCTCGCT CGAGCTCGGC
AAGGTGCCGT TCTTCGAGCC CGGGCTCGCC GAGCTCCTCT CGGCGCAGGT GGCGACCGGG
CGGCTGCGCT TCTCCACGGA TGCGGCAGCA GCCGCGGCCG ACGCCGACAT CCACTTCATC
TGCGTGGGCA CGCCGCAGCA GCGCGGCTCC CACGCCGCCG ACCTGCGCTT CGTGGAGGCA
GCTGCGCGGT CGATCGCGGA GAACCTCACC CACGATGCGC TGATCGTCGG GAAGTCCACG
GTGCCGGTCG GGACGGCGGC CCGGCTGCGC GCGCTGGTCG CCGAGCTCGC ACCGGCGGGG
GTGCGTGCCG AGCTCGTGTG GAACCCGGAG TTCCTGCGCG AGGGCAAGGC CGTCGACGAC
ACGCTCCACC CGGACCGCAT CGTGGTCGGC GGTGCGAGCC CCTGGGCCGC CGGCCTGCTC
CGCGAGCTGT ACGCGGCGCC GATCGCCGCC GGCGCGCCGG TCGTCGAGTG CGACCTCCCG
ACGGCGGAGC TCGTCAAGGT GAGCGCCAAC GCGTTCCTCG CGACCAAGAT CTCGTTCATC
AACGCCATCG CGTCGGTGTG CGAGGCGGCC GGCGCCGACG TCACCGTGCT CGCGGACGCG
CTCGGTCACG ACCCCCGGAT CGGGCGCCAG TTCCTCGATG CCGGACTCGG GTTCGGCGGG
GGATGCCTCC CGAAGGACAT CCGGGCTCTC ATGCACCGCG CGCGCGAGCT CGGCGTACAC
CGGGCGGCTG GGCTGCTGCA GGAGATCGAC GAGATCAACA TGGCGCAGCG GGAACGCGTC
ATCGAGATGG CGACGACGGC GTGCGGCGGC TCCGTGCTCA ACCGCCGGGT CGGCGTGCTG
GGTGCGGCGT TCAAGCCACG CACGGACGAC GTGCGGGACT CGCCGGCCCT CAACGTCGCC
GCCGCGCTGC ACCTGCGGGG AGCCCAGGTC ACCGTCTTCG ACCCCGAGGC GGCGGACACC
GCGCGGCGCA CGTTCCCGAC CCTCTCCTAC GCGAGCAGCG CAGCGGAGGC GGTGGAGGGG
AGCGACGTCG TCCTGCTGCT CACGGAGTGG CAGGAGTTCC TCGACGCCGA TCCGGCCGCG
CTGGCCGGGC TCACCCCGAC CCCGCGGATG ATCGACGCGC GCGGGAAGCT CTCGCCGGAG
CGGATGCGCG CCGCGGGCTG GGAGTTCGCA GGGCTGGGGC GCGTCGCGGC CTGA
 
Protein sequence
MSRSLTRLSR PPLADPLGAV PAPVPAVSAL GTDEPTARRR VAVVGTGYLG ATHAAAMASL 
GFDVVGVDTD ENKVRSLELG KVPFFEPGLA ELLSAQVATG RLRFSTDAAA AAADADIHFI
CVGTPQQRGS HAADLRFVEA AARSIAENLT HDALIVGKST VPVGTAARLR ALVAELAPAG
VRAELVWNPE FLREGKAVDD TLHPDRIVVG GASPWAAGLL RELYAAPIAA GAPVVECDLP
TAELVKVSAN AFLATKISFI NAIASVCEAA GADVTVLADA LGHDPRIGRQ FLDAGLGFGG
GCLPKDIRAL MHRARELGVH RAAGLLQEID EINMAQRERV IEMATTACGG SVLNRRVGVL
GAAFKPRTDD VRDSPALNVA AALHLRGAQV TVFDPEAADT ARRTFPTLSY ASSAAEAVEG
SDVVLLLTEW QEFLDADPAA LAGLTPTPRM IDARGKLSPE RMRAAGWEFA GLGRVAA