Gene Bcav_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1157 
Symbol 
ID7860616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1299283 
End bp1299783 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID643865241 
ProductGtrA family protein 
Protein accessionYP_002881179 
Protein GI229819653 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCC GCGCCCTCTC GTCAACCCGC CTCCGCGGCC TCCTCCCGGA GCTCCTGCGG 
TTCGGCTCGG TGGGCGCCGT CGCGTTCGTC GTCGACGTCG GGCTGTTCAA CCTCCTGCGA
TTTGGCCCCG GGCACCTGCT GGAGGCGAAG CCGCTGACGG CGAAGGTCGT CTCCGTCGCT
GTCGCGACGC TCGTGGCGTG GCTCGGCAAC CGCCACTGGA CGTTCTCGGA CCGGCGGACG
GCGTCACGCA CCCGGGAGTT CATCGGCTAC AGCCTCGTCA ACGTGGGCGG CATGGTCATC
GCCGTCGGCT GCCTGTGGTT CTCCCACTAC GTGCTCGGCC TGCAGACCGC CCTGGCGGAC
AACATCGCCG CGAACGTCGT CGGCCTCGGC CTCGGCACCG CGTTCCGCTA CCTCGGCTAC
CGCTCGTGGG TCTTCACCGG CGACGAGGAG AAGCCGGTCG CGGGCGTCGG GCCGGTGCTC
GAACCCGACC AGGTGGGCTG A
 
Protein sequence
MPTRALSSTR LRGLLPELLR FGSVGAVAFV VDVGLFNLLR FGPGHLLEAK PLTAKVVSVA 
VATLVAWLGN RHWTFSDRRT ASRTREFIGY SLVNVGGMVI AVGCLWFSHY VLGLQTALAD
NIAANVVGLG LGTAFRYLGY RSWVFTGDEE KPVAGVGPVL EPDQVG