Gene Bcav_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1146 
Symbol 
ID7860605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1287994 
End bp1289091 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID643865230 
Productoxidoreductase domain protein 
Protein accessionYP_002881168 
Protein GI229819642 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCT CACCGCGCCT CGTCGTCGTC GGCGCGGGCG GCATGGGCCG CGCCTGGATG 
CGGACGATCC TCGACGCCGA CGGCGCCACG CTCGCGGGCG TCGTCGATCT GCGGCCGGAC
GTGGCTCTCG CTGCGCTCGA GGACCTCGGC GCGTCCGACG TGCCCGCCGG CGACGACGTG
GTGACGCTGG CGCGCGAGGT GGGCGCGGAC GCCGTCGTCG ACGTCGCGAT CCCCGAGGCG
CACCACGCCG TGACCACCGC CGCGCTCTTC GCGGGGTATC CCGTGCTCGG CGAGAAGCCG
GCAGCCGTGG ACGTGGCGCA GGCGCTCTCG CTCGCCGCTG CGTCGGAGGT CACCGGCCGG
CTGTTCATGG TGAGCCAGTC GCGCCGCTGG AACCCGCACG TGGAGTCGCT GCGCGCTGCG
GTCGGGACGC TGGGGGCCGT GGGCTCGGCG ACCGCCGAGT TCTTCCGTGC CCCGCGGTTC
GGCGGGTTCC GCGAGGCGAT GGCGCAGCCG CTGCTCGTCG ACATGGCGAT CCACCACCTC
GACGCGGCGC GGTACGTGCT GGGCGCCGAG GCGGAGTCCG TCTGGTGCGA CACGTACAAC
CCGTCGTGGA GCTGGTACGA CGGCGACGCC GCCGCGGTGG CCGTGTTCGA GATGGCCGGC
GGCGCGCGGT TCTCGTACCA CGGGTCGTGG TGCGCGCCGG GTGCGGAGAC CTCGTGGAAC
GCGTCGTGGC GCATCGGCGG AGCGCTCGGC ACGGTGACGT GGGACGGCGA GACCGCGCCG
GTGGTGGATG ACGGGGACGA CGGCGGCCCG CACGCCGTCA CGTCCGCTGC GCCCTCGGAG
GGGATCGCCG CTGCGCTCGC GGCGTTCCTC GCCGCCCTGG CGGGCGGGAC GACGCCGTCG
GGCGAGATCC ACGAGAACGT GCGCAGCCTC GCGATGGTGG AGGCTGCGGT GGAGTCCGCG
CGGACGGGGG AGCGGGTGCG GCTCGACGAC CTGCTCGAGC GCGCTCGCGT CGACGCCGTC
GCAGCCGAGG CGAACCCCGA GGTCCGTGCG GTGCTCGCCG GGTGGTCGTC GGTGCGCGAG
GCGCTCGTCG CCCGCTGA
 
Protein sequence
MTTSPRLVVV GAGGMGRAWM RTILDADGAT LAGVVDLRPD VALAALEDLG ASDVPAGDDV 
VTLAREVGAD AVVDVAIPEA HHAVTTAALF AGYPVLGEKP AAVDVAQALS LAAASEVTGR
LFMVSQSRRW NPHVESLRAA VGTLGAVGSA TAEFFRAPRF GGFREAMAQP LLVDMAIHHL
DAARYVLGAE AESVWCDTYN PSWSWYDGDA AAVAVFEMAG GARFSYHGSW CAPGAETSWN
ASWRIGGALG TVTWDGETAP VVDDGDDGGP HAVTSAAPSE GIAAALAAFL AALAGGTTPS
GEIHENVRSL AMVEAAVESA RTGERVRLDD LLERARVDAV AAEANPEVRA VLAGWSSVRE
ALVAR