Gene Bcav_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1027 
Symbol 
ID7859800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1170674 
End bp1171177 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content76% 
IMG OID643865111 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_002881050 
Protein GI229819524 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.278653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0205015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCG ACGCACCCGA GGAGCAGCGA CCCGAGTCAC CCGGCGAGGC CCGCGCCCGC 
GCGGCGATCG AGGCGAGCGG CGTCGAGCAC GTGATCGTCC GGCACGGCCC GGCCCGCTCC
CTGGCGGAGG CGGCAGCCGC CCGGGGTGTC GCGCCGTCGT CGCTCATCAA GACGATGGTC
GTGCGGCGCG GCGAGGGCGA CTACCTCTTC GTGCTCGTGC CCGGCGACCG CACGATCTCC
TGGCCCAAGC TGCGCGCCCT GCTCGGCGTG AGTCGCCTCT CGATGCCGGA TGCCGCCACG
GCCCTCGACG TCACGGGCTT CGAGCGCGGC ACCATCACGC CGTTCGGCGC GACGCACGCG
TGGCCGGTCG TGGCGGACGA ACGCGTGCAC GGCGTGGTGT CCATCGGCGC CGGCGGGCAC
GGCGTCGGCA TCCGCCTGGA CGGTGCCGCG CTGACGACGG CGCTCGCCGC GCAGGTCGCG
GACGTCACCG AGCCCGAGGC GTAG
 
Protein sequence
MVSDAPEEQR PESPGEARAR AAIEASGVEH VIVRHGPARS LAEAAAARGV APSSLIKTMV 
VRRGEGDYLF VLVPGDRTIS WPKLRALLGV SRLSMPDAAT ALDVTGFERG TITPFGATHA
WPVVADERVH GVVSIGAGGH GVGIRLDGAA LTTALAAQVA DVTEPEA