Gene Bcav_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0961 
Symbol 
ID7858182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1091946 
End bp1093124 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content76% 
IMG OID643865044 
Productaminotransferase class V 
Protein accessionYP_002880984 
Protein GI229819458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.196608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG GCGCGGCGGC GCTCAAGGCC CACTTCGGGC GCGCCCTCGC GTCCGACGAT 
CGGCTGCACG TCGCGGCGCA CAGCCACCAT CCGTGGCCCG ACGTCACCCG CGACGCGCAC
CTGGCGGCCT GGGACCTGGC GGCCGCGCAG CTGGACGACA AGTGGGACAC GATCCTGCGC
ACCGTGGTCC CGGAGGCGCA GGGGCACGTG GCGCGCAGGC TGGGCCTGCG CGACCCCGCC
ACCGTGGCGT TCGCCCCGAA CACCCACGAG CTGCTCGTCC GCATCACCTC GGCCCTTCCG
CGCCCGTTCC GCGTGCTCAC GACGGACGCG GAGTTCCACA GCGCCGCGCG ACAGCTCGCG
CGGTGGGAGG AGGCCGGCGT CGCGCACGTG GACCGCGTCC CGGCCGAGTC CTTCGCGACG
TTCCCGGAGC GGTTCGTCGC CGCCATGCGC CCGGAGCACG GCCTGGTGCT CGTCAGCCAC
GTGTTCTTCG ACTCCGGGTA CGTGGTGCCC GACCTCGCCC AGCTCGTGGA CGCGGTGCCG
AGCCCGGACG CGCTCGTCGT CGTCGACGGG TACCACGCGT TCATGGCCGT GCCCACCGAC
CTCGGCGCGA TCGCCTCCCG CGCCTTCTAC CTCGCCGGCG GGTACAAGTA CGCGATGGCC
GGCGAGGGGG CGTGCTTCGC CCACGCGCCC GCCGGGTACG CGACCCGGCC GGTGGACACC
GGGTGGTTCG CGGCGTTCGG CGCCCTGGCC GACGCCGGGG ACGGGCGGGT CGGGTACCCG
GCCGACGCCG GTCGGCTCGC CGGCTCGACC ACCGACCCGT CCGGGCTGTT CCGGTTCAAC
GCGGTGCAGC GCTGGCTGGA CGGGCTCGGC GTCGACGTGC CGGCGATCCA TGCCCACGTC
GGCGCGCTCC AGACGAGGCT CCTCGCGGCG CTCGACGCCG AGCCGCTCGC CGCCCTGCCG
GTCACGAGCC TCGTCCCGGG GCGCCAGGTG CCCGATCGCG GCCACTTCCT CACGTTCCGC
ACCGACCGCG CGCCCGAGGT GGAGGCGGCG CTGGCGGCGC GCGGCGTCGT CGCCGACCGG
CGCGGGGAAC GGCTGCGCCT CGGGTTCGGC GTGTATCACG ACGACGACGA CGTCGACCGG
CTCGCCGCCG AGCTCGCCAT CGTCGCGCGG CACGCGTAG
 
Protein sequence
MTGGAAALKA HFGRALASDD RLHVAAHSHH PWPDVTRDAH LAAWDLAAAQ LDDKWDTILR 
TVVPEAQGHV ARRLGLRDPA TVAFAPNTHE LLVRITSALP RPFRVLTTDA EFHSAARQLA
RWEEAGVAHV DRVPAESFAT FPERFVAAMR PEHGLVLVSH VFFDSGYVVP DLAQLVDAVP
SPDALVVVDG YHAFMAVPTD LGAIASRAFY LAGGYKYAMA GEGACFAHAP AGYATRPVDT
GWFAAFGALA DAGDGRVGYP ADAGRLAGST TDPSGLFRFN AVQRWLDGLG VDVPAIHAHV
GALQTRLLAA LDAEPLAALP VTSLVPGRQV PDRGHFLTFR TDRAPEVEAA LAARGVVADR
RGERLRLGFG VYHDDDDVDR LAAELAIVAR HA