Gene Bcav_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0843 
Symbol 
ID7860207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp938421 
End bp940520 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content76% 
IMG OID643864924 
Productprotein of unknown function DUF477 
Protein accessionYP_002880866 
Protein GI229819340 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.374728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.308126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGAC GCCGCACGAC ACCCCTGACC CAGGCTGACG CAGGGTCTCC CGCACGCCAC 
CGCACGCGCC TCGCGGCCAC GGCCTGCGCC GTCGTCGCCG CCACCGTGCT GCTCGCCCCT
GCCGCTCTCG CCGACGAGCC GCTCCGGCTC GACGACCGCG TGACCGACAC CACCAGCGCC
GCGGTCCTCG CAGGGAGCAC GGCCGACATC CTGGACGCGG CGGACGCCCT CGCGGAGGAC
ACTCCGTACG ACCTGTTCGT CGTGTACGTC GACTCGTTCG ACGGCATGGA CGGCGGCGAC
TGGGCCGACG AGACGGCGAA CCTGTCGCAG CTGGGTGACG ACGACGCGTT GCTCGCCGTC
GCGGTCGAGG ACCGGGTCTA CGACTTCTCG CTCGGGGCGA GCGCGTCCGT CACCGACGAC
CAGCTCGCCA CGATCCGCTC GGAGCAGATC GAACCCGCGC TGGCCGACGA CGACTGGGCA
GGTGCGGCGA TCGCGGCCGC GGACGGACTG CGCGACGCGG CCGGCGGCGG CAGCGGGGCC
GCCTCCGGCG GGGGCGGCTC GAACGCGGGG TGGATCATCG TCGGCATCCT CGTGGTCGCC
GCGATCGTGG TGCTCGTCGT GTGGCTGGTG CGCCGGAGCT CGCGGCAGCG GCAGCAGGCC
GGCCCCGCCT CGGCCCCCGG TTCGCTCGAG TCCCTGAGCA CGGAAGAGCT GAACCGCCGT
GCGAGCGCGG GACTCGTCGC GATCGACGAC GGCATGCGCA CCTACGAGCA GGAGCTCGGG
TTCGCCGAGG CCCAGTTCGG GTCCGCCGCG ACGGCGTCCT TCGCGACGGC GCTCGCCGAC
GCCAGGCCGA AGGTCGCCCG CGCGTTCCAG CTGCGCCAGG AGCTCGACGA CTCCACCGCC
GAGGCGGAGC CGCAGGCCCG CGCGATGATG GCCGAGATCA TCACGACGCT GGAGCAGGTC
CAGGCCTCGC TGCAGGGCGA GGCCCAGCAG TTCGTCGAGC TCCGCGAGGA GCAGCGCAAC
GCGCCGGCCA CGCTCGACGC GCTGGAGGGC CGGGTCACCG AGCTCGCCGG CCGGGTGCCG
GCCGCGCGGG AGACGCTCAC GAACCTGGCG GTCACCTACC CCGCCACGGC GCTCGCCTCG
GTGGTGGCGA ACCCCGATCA GGCCCAGCGC CTGCTGGACG GCGCCACGGA GGCGGTGACG
CAGGGCCGGG CTGCGGTCGA GCGCCAGGAC GGCGGCGCCG CGCTCGAGCA GATCCGGGTC
GCGACGGGCG CGACCGGTCA GGCGGCGACG CTGCTCGACG CCGTCTCCCG CGCGGGCGAC
GACCTGGCCC AGGCGGCGCC GAAGCTCGAG GCCGCCATCG CCTCGATCTC CGCCGACCTC
GCCGACGCCG ACAGGCTCGC CACGAGCCAG GGGCACGGGG TCGACGCCCA GGTCGCCGAG
GCCACGCAGG CCATCGCCGC GGCGCGCGCC GCATCGTCCG GCGGCGACCC GCTCGCGGCC
CTGACCCGGA TCGCGAACGC GGAGGCCGCC CTCGACGCGT CGCTCGCGCC GCTGCGCGAG
CAGGCGGAAG TCACGCAGCG GGCCGCGGCC CAGCTCGAGG GCACCCTCGG CCGTCTCGAG
TCGCAGGTCC GCGCGACGAA CGACTTCGTC GAGACCCGAC GCGGCGCCGT CGGCCCCGAG
GCCCGCACGC GCCTCGCCGA GGCGATCCGG CTCCTCACCC AGGCGCGCAC GCAGGCAGCG
ACGGATCCCG GCGCCGCGCT GGCCACCGCC CAGCAGGCGC AGGAGTACGC GACGTCGGCC
CAGAGCCTCG CCCAGCGCGA CGTCGAGTCC TGGGAGCGGT CGCAGCAGGT CCCGCAGCAG
TCCTCGTCCG GAGGGCCCGA CCTCGGGTCG ATGATCCTCG GCGGCATCCT GTTCGGGAAC
CGCGGTGGGG GCGGGGGCGG CGGCTGGGGA GGCGGGTTCA CCGGCGGCGG CTACGGCGGC
GGTTCGAGCC GCGGCGGGTC ACGGCGCTCC AGCGGCGGGT CGTTCGGCGG GAGCCGGCGC
AGCAGCGGCG GCAGCCGACG GAGCAGCGGC GGTCGCCGCG GCGGTGGGGG GCGCTTCTGA
 
Protein sequence
MTRRRTTPLT QADAGSPARH RTRLAATACA VVAATVLLAP AALADEPLRL DDRVTDTTSA 
AVLAGSTADI LDAADALAED TPYDLFVVYV DSFDGMDGGD WADETANLSQ LGDDDALLAV
AVEDRVYDFS LGASASVTDD QLATIRSEQI EPALADDDWA GAAIAAADGL RDAAGGGSGA
ASGGGGSNAG WIIVGILVVA AIVVLVVWLV RRSSRQRQQA GPASAPGSLE SLSTEELNRR
ASAGLVAIDD GMRTYEQELG FAEAQFGSAA TASFATALAD ARPKVARAFQ LRQELDDSTA
EAEPQARAMM AEIITTLEQV QASLQGEAQQ FVELREEQRN APATLDALEG RVTELAGRVP
AARETLTNLA VTYPATALAS VVANPDQAQR LLDGATEAVT QGRAAVERQD GGAALEQIRV
ATGATGQAAT LLDAVSRAGD DLAQAAPKLE AAIASISADL ADADRLATSQ GHGVDAQVAE
ATQAIAAARA ASSGGDPLAA LTRIANAEAA LDASLAPLRE QAEVTQRAAA QLEGTLGRLE
SQVRATNDFV ETRRGAVGPE ARTRLAEAIR LLTQARTQAA TDPGAALATA QQAQEYATSA
QSLAQRDVES WERSQQVPQQ SSSGGPDLGS MILGGILFGN RGGGGGGGWG GGFTGGGYGG
GSSRGGSRRS SGGSFGGSRR SSGGSRRSSG GRRGGGGRF