Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0843 |
Symbol | |
ID | 7860207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 938421 |
End bp | 940520 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643864924 |
Product | protein of unknown function DUF477 |
Protein accession | YP_002880866 |
Protein GI | 229819340 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.374728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.308126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGAC GCCGCACGAC ACCCCTGACC CAGGCTGACG CAGGGTCTCC CGCACGCCAC CGCACGCGCC TCGCGGCCAC GGCCTGCGCC GTCGTCGCCG CCACCGTGCT GCTCGCCCCT GCCGCTCTCG CCGACGAGCC GCTCCGGCTC GACGACCGCG TGACCGACAC CACCAGCGCC GCGGTCCTCG CAGGGAGCAC GGCCGACATC CTGGACGCGG CGGACGCCCT CGCGGAGGAC ACTCCGTACG ACCTGTTCGT CGTGTACGTC GACTCGTTCG ACGGCATGGA CGGCGGCGAC TGGGCCGACG AGACGGCGAA CCTGTCGCAG CTGGGTGACG ACGACGCGTT GCTCGCCGTC GCGGTCGAGG ACCGGGTCTA CGACTTCTCG CTCGGGGCGA GCGCGTCCGT CACCGACGAC CAGCTCGCCA CGATCCGCTC GGAGCAGATC GAACCCGCGC TGGCCGACGA CGACTGGGCA GGTGCGGCGA TCGCGGCCGC GGACGGACTG CGCGACGCGG CCGGCGGCGG CAGCGGGGCC GCCTCCGGCG GGGGCGGCTC GAACGCGGGG TGGATCATCG TCGGCATCCT CGTGGTCGCC GCGATCGTGG TGCTCGTCGT GTGGCTGGTG CGCCGGAGCT CGCGGCAGCG GCAGCAGGCC GGCCCCGCCT CGGCCCCCGG TTCGCTCGAG TCCCTGAGCA CGGAAGAGCT GAACCGCCGT GCGAGCGCGG GACTCGTCGC GATCGACGAC GGCATGCGCA CCTACGAGCA GGAGCTCGGG TTCGCCGAGG CCCAGTTCGG GTCCGCCGCG ACGGCGTCCT TCGCGACGGC GCTCGCCGAC GCCAGGCCGA AGGTCGCCCG CGCGTTCCAG CTGCGCCAGG AGCTCGACGA CTCCACCGCC GAGGCGGAGC CGCAGGCCCG CGCGATGATG GCCGAGATCA TCACGACGCT GGAGCAGGTC CAGGCCTCGC TGCAGGGCGA GGCCCAGCAG TTCGTCGAGC TCCGCGAGGA GCAGCGCAAC GCGCCGGCCA CGCTCGACGC GCTGGAGGGC CGGGTCACCG AGCTCGCCGG CCGGGTGCCG GCCGCGCGGG AGACGCTCAC GAACCTGGCG GTCACCTACC CCGCCACGGC GCTCGCCTCG GTGGTGGCGA ACCCCGATCA GGCCCAGCGC CTGCTGGACG GCGCCACGGA GGCGGTGACG CAGGGCCGGG CTGCGGTCGA GCGCCAGGAC GGCGGCGCCG CGCTCGAGCA GATCCGGGTC GCGACGGGCG CGACCGGTCA GGCGGCGACG CTGCTCGACG CCGTCTCCCG CGCGGGCGAC GACCTGGCCC AGGCGGCGCC GAAGCTCGAG GCCGCCATCG CCTCGATCTC CGCCGACCTC GCCGACGCCG ACAGGCTCGC CACGAGCCAG GGGCACGGGG TCGACGCCCA GGTCGCCGAG GCCACGCAGG CCATCGCCGC GGCGCGCGCC GCATCGTCCG GCGGCGACCC GCTCGCGGCC CTGACCCGGA TCGCGAACGC GGAGGCCGCC CTCGACGCGT CGCTCGCGCC GCTGCGCGAG CAGGCGGAAG TCACGCAGCG GGCCGCGGCC CAGCTCGAGG GCACCCTCGG CCGTCTCGAG TCGCAGGTCC GCGCGACGAA CGACTTCGTC GAGACCCGAC GCGGCGCCGT CGGCCCCGAG GCCCGCACGC GCCTCGCCGA GGCGATCCGG CTCCTCACCC AGGCGCGCAC GCAGGCAGCG ACGGATCCCG GCGCCGCGCT GGCCACCGCC CAGCAGGCGC AGGAGTACGC GACGTCGGCC CAGAGCCTCG CCCAGCGCGA CGTCGAGTCC TGGGAGCGGT CGCAGCAGGT CCCGCAGCAG TCCTCGTCCG GAGGGCCCGA CCTCGGGTCG ATGATCCTCG GCGGCATCCT GTTCGGGAAC CGCGGTGGGG GCGGGGGCGG CGGCTGGGGA GGCGGGTTCA CCGGCGGCGG CTACGGCGGC GGTTCGAGCC GCGGCGGGTC ACGGCGCTCC AGCGGCGGGT CGTTCGGCGG GAGCCGGCGC AGCAGCGGCG GCAGCCGACG GAGCAGCGGC GGTCGCCGCG GCGGTGGGGG GCGCTTCTGA
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Protein sequence | MTRRRTTPLT QADAGSPARH RTRLAATACA VVAATVLLAP AALADEPLRL DDRVTDTTSA AVLAGSTADI LDAADALAED TPYDLFVVYV DSFDGMDGGD WADETANLSQ LGDDDALLAV AVEDRVYDFS LGASASVTDD QLATIRSEQI EPALADDDWA GAAIAAADGL RDAAGGGSGA ASGGGGSNAG WIIVGILVVA AIVVLVVWLV RRSSRQRQQA GPASAPGSLE SLSTEELNRR ASAGLVAIDD GMRTYEQELG FAEAQFGSAA TASFATALAD ARPKVARAFQ LRQELDDSTA EAEPQARAMM AEIITTLEQV QASLQGEAQQ FVELREEQRN APATLDALEG RVTELAGRVP AARETLTNLA VTYPATALAS VVANPDQAQR LLDGATEAVT QGRAAVERQD GGAALEQIRV ATGATGQAAT LLDAVSRAGD DLAQAAPKLE AAIASISADL ADADRLATSQ GHGVDAQVAE ATQAIAAARA ASSGGDPLAA LTRIANAEAA LDASLAPLRE QAEVTQRAAA QLEGTLGRLE SQVRATNDFV ETRRGAVGPE ARTRLAEAIR LLTQARTQAA TDPGAALATA QQAQEYATSA QSLAQRDVES WERSQQVPQQ SSSGGPDLGS MILGGILFGN RGGGGGGGWG GGFTGGGYGG GSSRGGSRRS SGGSFGGSRR SSGGSRRSSG GRRGGGGRF
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