Gene Bcav_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0780 
Symbol 
ID7859111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp868926 
End bp870350 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content72% 
IMG OID643864860 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002880803 
Protein GI229819277 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.934407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.176113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC GCCTCTACGA CTCCGCCACG CGAGCGGTGC GCGACTTCGA ACCCCTCGAA 
CCGGGCAAGG TCGGCATCTA CCTGTGTGGC GCGACGGTGC AGGGCGAGCC GCACGTGGGT
CACCTGCGCA GCGTCATCGC GTTCGACGTC CTCGTGCGCT GGCTGCGACG CAGCGGGCTC
GACGTCACGA TGATCCGCAA CGTCACCGAC ATCGACGACA AGATCCTCGC GAAGTCCGCC
GAGGCAGGCG TGCCGTGGTG GGCGTGGGCC TACCGGCACG AGCGCGCGTT CTCCGACGCG
TACGACGCCG TCGGCAACCT CCCGCCGACG TACGAGCCGC GCGCGACCGG GCACGTCGTC
GAGATGATCG AGCTCATGCA GCGCCTCGTC GATCGCGGGA ACGCGTATCG CGGCAAGGAC
GGCAACGTGT GGTTCGACGT GCGGTCGCTG GCGGACTACG GCTCCCTCAC CCGGCAGAAG
CTCGAGAACA TGAGCACGCT GGAGGAGGAG TCGAGCGACA AGGCCGACCC GCACGACTTC
GCCCTGTGGA AGGGCCTCAA GCCGGGTGAC CCGGAGACGG CGTCCTGGGA GACGCCGTTC
GGCCGCGGCC GCCCGGGCTG GCACCTCGAG TGCTCGGCCA TGGCGTATCG ATACCTCGGC
GAGACGTTCG ACATCCACGG CGGGGGCATC GACCTGCGCT TTCCGCACCA CGAGAACGAG
CAGGCGCAGA GCCACGCCGC CGGCTACGGG TTCGCGCGGT ACTGGCTGCA CAACGCCTGG
GTCACGGCCG GCGGCGAGAA GATGAGCAAG TCGCTCGGCA ACTACCTGAC CGCTGCCGAG
GCGCTTGGCC GCGTGCCCGC CGTCGTCCTG CGCTACGCGC TCGCGTCGGT GCACTACCGC
TCCTCGGTGG AGTTCACCGA GGCGACCCTG GCCGAGGCCC GCGTCACGTG GGAGCGGATC
GCCGGCTTCG TCACGCGCGC TGCCGAGCTC ACGGGCCCGG TGGGCGACGA CGGCGCCGCG
CGTCTTGCTG ACGTCGTCCT GCCGATCGCG TTCGTCGAGG CGATGGACGA CGACCTCAAC
GTGTCCGCGG CGCTCGCCGT GCTGCACGAG CACATCCGCC TCGGCAACAC GGCGCTGAGC
TCCGGTGAGG CGGGCGACGC GGCGGCCGAG CTGAGCGCCG TCCGCGGCAT GCTCGACGTG
CTCGGCCTCG ACCCGCTCGC CGAGCCGTGG GTGGGCGAGG CGAGCGCCAC GCCGCTGCGG
GGCGCCGTCG ACGTCCTCGT CGAAGGCGTC CTGGCGGACC GGTCCGCGGC ACGTGCCGCG
AAGGACTGGG CGCGTGCCGA CGCGCTGCGC GACCAGCTCG CGGCGGCGGG CGTCGTCGTC
GAGGACTCAC CCAGCGGTGC CCGCTGGACG ATCAAGGGAA CGTGA
 
Protein sequence
MTLRLYDSAT RAVRDFEPLE PGKVGIYLCG ATVQGEPHVG HLRSVIAFDV LVRWLRRSGL 
DVTMIRNVTD IDDKILAKSA EAGVPWWAWA YRHERAFSDA YDAVGNLPPT YEPRATGHVV
EMIELMQRLV DRGNAYRGKD GNVWFDVRSL ADYGSLTRQK LENMSTLEEE SSDKADPHDF
ALWKGLKPGD PETASWETPF GRGRPGWHLE CSAMAYRYLG ETFDIHGGGI DLRFPHHENE
QAQSHAAGYG FARYWLHNAW VTAGGEKMSK SLGNYLTAAE ALGRVPAVVL RYALASVHYR
SSVEFTEATL AEARVTWERI AGFVTRAAEL TGPVGDDGAA RLADVVLPIA FVEAMDDDLN
VSAALAVLHE HIRLGNTALS SGEAGDAAAE LSAVRGMLDV LGLDPLAEPW VGEASATPLR
GAVDVLVEGV LADRSAARAA KDWARADALR DQLAAAGVVV EDSPSGARWT IKGT