| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0777 |
|---|
| Symbol | |
|---|
| ID | 7859108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 865025 |
|---|
| End bp | 866932 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864857 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002880800 |
|---|
| Protein GI | 229819274 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.193136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.304338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG TCATCAACCC CTCGCTCGAG CGGGGCCGCG GCGACGGCTC GTCTCGGGGC
GGCCGGATGG ACTCCGGCGC ACGCACGGAC CCGAAGGACC TCGCCCAGCT GGAGGCGCAC
CCCGTCTCGC TGGCGCGCAT CACGGGCCTG TTCCGTCCCT ACGCAGGCAG GCTCGGCGTC
GTCGTCGGCC TCATCGTCGC GTCCTCCCTC GCCGGGCTCG CGACCCCGTT CCTCACCCGC
CATCTCATCG ACGACGCCAT CCCGCGGCAG GACGTGAGGC TCCTCCTCGT GCTCGTCGGC
GCGATGCTGG CGGTCACCGT GGTGACGTCG GTGCTGGGCG TGCTGCAGAC GTGGCTCGCG
ACGACGGTCG GCCAGCGCGT GATGCACGGC CTGCGCACCG GCGTCTTCGC CCACCTGCAG
CGCCAGTCGA TGAGCTTCTT CACGCGGACC CGCGGCGGCG AGGTCACGTC GCGCCTCACG
CACGACATCG GCGCGATGCA GAACGTCGTG ACGTCGACGG CGACGTCGAT CGCCGCGAAC
GTCACCACCG CCGTCGGGAC GGCGATCGCG ATGGTCGCGC TGAGCTGGCG GCTGGCGCTG
CTGTCGCTCG TCGTCCTGCC CCCGGCCATC TGGGTCACGC GCAAGGTCGC GCGGATGCGA
CGCGAGGTCA CGGCGCGGCG CCAGGGTGCG CTCGCGGACC TGCAGTCGCA GATCGACGAG
TCGCTGTCGG TGAGCGGCGT GCTGCTCAGC AAGACTCTCG GCGCCGGTCC GGCCCTGTCC
ACGCGGTTCA CCGACACGTC CGGCCGCCTG CTCGAGCTCG AGGTCGCCTC GCAGCTCGCG
GGTCGCTGGC GCATGGCCAC GCTCAACCTC GTGTTCGCGG CGATCCCGGC GCTCATCTAC
CTCGCGGCGG GCCTGCTGGC CACGTCCGGC GGGATGACCA TCGGGACGCT CGTCGCCTTC
ACCGCCCTGC AGGCCGGCCT GTTCCGGCCC CTCATGGGCG TGCTCGGCGT CGGCGTCCAG
GTGACGAGCT CGATGGCGCT GTTCAGCCGC GTCTTCGAGT ACCTCGACCT CGTGGTCGAG
GTCGACGAGC CGGCGCGGCC GGCCGACGTC GACCCGCGCG CCGTGCGTGG CACCGTCCGG
CTCGACGGCG TCTCGTTCCG CTACGCCGAC GCCGATGTCG ACGCGCTCAG CGGCGTCGAC
CTCGAGGTCC CGGCCGGGTC CCACCTCGCG CTCGTCGGGG AGACGGGCTC CGGGAAGAGC
ACGCTCGCCT CCCTGGTGGC GCTGCTGCAC GACCCGACGT CGGGCCGCCT CACGATCGAC
GGCGTCGACC TGCGCGACCT CCGCCTGGAG ACGCTCGCGG GCCTGGTCGG CGTCGTGTCG
CAGGAGACGT ACCTGTGGCA CACGACGGTC CGGGAGAACC TCCGCTTCGC CCGTCCCGAC
GCCACGGACG CGGAGATCGA GGACGCTGCG CGCGCCGCGC AGATCCACGA CCTCATCGCG
TCGTTGCCCC TCGGGTACGA GACGGTCGTG GGAGCCCGTG GGCACCGGTT CTCCGGTGGC
GAGAAGCAGC GGCTCGCGAT CGCGCGGACC CTGCTGCGGG ACCCGCGGGT CCTGGTGCTC
GACGAGGCGA CGAGCGCCCT CGACAACGCC ACGGAGCATG CCGTGCAGAC GGCGCTCGAC
GTCGTCAGCC GCGGCCGCAC GACGATCACG ATCGCGCACC GCCTCTCCAC CGTGCGGGAC
GCGGACGCGA TCGCCGTGCT GGACCACGGG CGGGTCGTCG AGCTCGGGAC GCACGCCGAG
CTCATGGCAC GCGCGGGGCG GTACCACTCG CTCGTCGTCG GTCAGTTCTC AGCGGCGGAC
GACGACGGCG CCGCTCCCGT GGAGCGGGAG CTCGCCGTCG TCTCGTGA
|
|---|
| Protein sequence | MSDVINPSLE RGRGDGSSRG GRMDSGARTD PKDLAQLEAH PVSLARITGL FRPYAGRLGV
VVGLIVASSL AGLATPFLTR HLIDDAIPRQ DVRLLLVLVG AMLAVTVVTS VLGVLQTWLA
TTVGQRVMHG LRTGVFAHLQ RQSMSFFTRT RGGEVTSRLT HDIGAMQNVV TSTATSIAAN
VTTAVGTAIA MVALSWRLAL LSLVVLPPAI WVTRKVARMR REVTARRQGA LADLQSQIDE
SLSVSGVLLS KTLGAGPALS TRFTDTSGRL LELEVASQLA GRWRMATLNL VFAAIPALIY
LAAGLLATSG GMTIGTLVAF TALQAGLFRP LMGVLGVGVQ VTSSMALFSR VFEYLDLVVE
VDEPARPADV DPRAVRGTVR LDGVSFRYAD ADVDALSGVD LEVPAGSHLA LVGETGSGKS
TLASLVALLH DPTSGRLTID GVDLRDLRLE TLAGLVGVVS QETYLWHTTV RENLRFARPD
ATDAEIEDAA RAAQIHDLIA SLPLGYETVV GARGHRFSGG EKQRLAIART LLRDPRVLVL
DEATSALDNA TEHAVQTALD VVSRGRTTIT IAHRLSTVRD ADAIAVLDHG RVVELGTHAE
LMARAGRYHS LVVGQFSAAD DDGAAPVERE LAVVS
|
|---|
| |