| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0598 |
|---|
| Symbol | |
|---|
| ID | 7861061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 662690 |
|---|
| End bp | 664456 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864678 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002880623 |
|---|
| Protein GI | 229819097 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACA CACCCGACCA CGTCCTCGAC GTCCGCGACC TGAGGGTCTC GTTCGTCACC
GACCACGGCG CGGTCCGCGC CGTCGACGGT ATTTCCTTCG CCGTCCCGCG CGGTTCGACG
ACGTGCCTGG TGGGGGAGTC CGGGTCCGGG AAGTCGGCGA CGGCGCGGTC GATCCTGCAG
GTGCTCGACG TCGCCGGCCG GATCGACGGC GGCGAGATCC TCTTCCGCGC GGCGGCCGGT
GCGGACGCCG TCGACCTCGC AGCCCTGGAC GCGCGCGGCC CCGCGATCCG CGACGTGCGC
GGACGTGACA TCGGCATGGT CTTCCAGGAG CCGATGTCCG CGCTCAGCCC GGTCCACACG
ATCGGCAACC AGATCGCCGA GGTCCTCGCG ATCCACGAGG GGCTCGACCC GCGTTCGAAG
GAGGCGCGAC GGCGGGTGGT CGCCGAGCTC GAGCTCGTCG GCATCCCCCG GGCCGCCGAG
CGGTTCGACG CGCACACGTT CCAGCTCTCG GGGGGCATGC GGCAGCGCGC GATGATCGCG
ATGGCGCTCA TCTCGAGGCC TGCGCTCCTC ATCGCCGACG AGCCGACCAC GGCGCTCGAC
GTCACGACCC AGGCGCAGAT CCTCGACCTC CTCGCCGAGC TCAAGGACAC GCTCGGGATG
TCGATGCTGT TCATCACGCA CGACCTCGGC GTCGTGGCCG AGATCGCTGA CGACGTCGCG
GTGATGCACG ACGGGAACGT CGTGGAGGCC GGCGGCGTGC GGCAGATCTT CCACGCGCCG
CGCGACCGCT ACACCAGGCA CCTGCTGGCG TCGTTGCCGC AGCGCGCCGA CAGCCCCCTC
GCCGTCCACG AGCCGGAGCC GAGCGCCGTC GCCGCGGAGG AGACGTCCAC CGCGCAGGAG
AAGCCCCTGC TCGAGGTGGA GGACCTCGTC ATGGAGTTCC GCCTGCCGAG CCGGTCGCGG
TTCGGCCGGT CGAAGGAGAT CCTGCGGGCC GTCGACGGCG TCAGCCTGGC GCTGCACCCG
GGCCGCACGC TCGGGCTCGT GGGTGAGTCC GGGTCCGGCA AGACGACGGT CGGGCGCACG
ATCCTGCGTG CCTACGAACC GAAGCAGGGC AGCATCCGGT ACCGCACGAC GTCCGGCGAC
GAGGTGGACC TCGCGCGGCT CGGGAACGCG GCGCTCCGGC CGTTCCGGCG GGAGATCCGC
ATGGTGTTCC AGGACCCGTA CTCCTCGCTC AACCCGCGCA TGACCGTCGA GCAGGTCGTC
ACCGAGCCCC TCCGCACCGC CGGCGTGAAG GACCGCGACG AGCGGCGGGA GCGCGCGGCG
TCGATGCTGC GGCGCGTCGG GCTCAACCCG GCGATGCTCG CGCGGTACCC CCACGCGTTC
TCCGGCGGCG AGCGTCAGCG CATCGGCATC GCCCGCGCGC TCATCACGCA GCCGCGGATC
GTCGTCGCCG ACGAGGCGGT GTCGGCCCTC GACGTCTCCG TGCGCACCCA GGTGCTCGAG
CTGCTCGCGG AGCTGCGCGA GGAGATGGGC CTCGCCTACC TGTTCATCTC GCACGACCTC
TCCGTGGTCG AGCGCGTGTG CGACGACGTC GCCGTGATGT ACCGCGGCTC GATCGTGGAG
CGCGGCGAGG TCGACGCCGT GTTCGCGGAC CCGCAGCACG GGTACACCCA GGCGCTGCTG
TCGGCGGTGC CGATCGCCGA CCCGGACGAG CGGGGCACCC GGACGCGCGT CACGTACGCC
CCGGAGCTCG TCGCCCAGCC CGCCTGA
|
|---|
| Protein sequence | MNDTPDHVLD VRDLRVSFVT DHGAVRAVDG ISFAVPRGST TCLVGESGSG KSATARSILQ
VLDVAGRIDG GEILFRAAAG ADAVDLAALD ARGPAIRDVR GRDIGMVFQE PMSALSPVHT
IGNQIAEVLA IHEGLDPRSK EARRRVVAEL ELVGIPRAAE RFDAHTFQLS GGMRQRAMIA
MALISRPALL IADEPTTALD VTTQAQILDL LAELKDTLGM SMLFITHDLG VVAEIADDVA
VMHDGNVVEA GGVRQIFHAP RDRYTRHLLA SLPQRADSPL AVHEPEPSAV AAEETSTAQE
KPLLEVEDLV MEFRLPSRSR FGRSKEILRA VDGVSLALHP GRTLGLVGES GSGKTTVGRT
ILRAYEPKQG SIRYRTTSGD EVDLARLGNA ALRPFRREIR MVFQDPYSSL NPRMTVEQVV
TEPLRTAGVK DRDERRERAA SMLRRVGLNP AMLARYPHAF SGGERQRIGI ARALITQPRI
VVADEAVSAL DVSVRTQVLE LLAELREEMG LAYLFISHDL SVVERVCDDV AVMYRGSIVE
RGEVDAVFAD PQHGYTQALL SAVPIADPDE RGTRTRVTYA PELVAQPA
|
|---|
| |