Gene Bcav_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0595 
Symbol 
ID7861058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp658462 
End bp660399 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content68% 
IMG OID643864675 
Productextracellular solute-binding protein family 5 
Protein accessionYP_002880620 
Protein GI229819094 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA CGCTCGCCGC GATGACGCGA CGTGGGTTCC TCGCGGTCGG CAGCGCAGGG 
CTGGGCGGGG CAGCCCTCGC CGCCTGCACG TCGTCATCGG AGACGCCCGA GTTCGCCGCG
GACACCGACG CCCTCGAGTC GCCCATGCTC GCCGAGCTGG TCGCCGCCGG GAGCCTGCCG
GAGCTGGCCG AGCGCCTGCC CGCCACCCCG ATGGTCGTCG AGCCGATCGA GGGTACGGGA
GCGTTCGGGG GCACCCTGCA GCGGGCCCAG ACCGACGCGA CGGCGACCGG CGTCATGCAG
TCGTTCGCCC CCACGGGTCT CCTCGAGTGG AATGTCGCCT CCGACGCCTC GCAGGAGAGC
CTCGCGGAGT CCTACGAGAT CAGCGACGAC AACCGCGTGT ACACGTTCAC GCTGCGCGAG
GGGCTGAAGT GGTCCGACGG CGAGCCGTTC ACCTCGGCCG ACCTCGCGTT CGCGATCGAG
AACTGGCTCG GCAACGCGAC GCTGGTGCCG GTGCCGCCCT TCTGGTATTC CGACGTCGAC
CAGCAGCTGC CGATGTTCGA CGCGCCCGAC GAACGGACCG TCGTCATCGA GTTCCGCGAA
CCCTTCTCGT TGTTCGAGAA GTACATGTGT CACCCGGGCG TGAGCACGCA GTTCATCAAG
CCCAAGCACT ACCTGGAGCA GTTCCACCCG GACTTCGCCG ACCAGGCCGA CGTCGACGCC
GCGTCAGCCG CCGCGGGCTT CGACTCGTGG GACCAGTACT TCGCCGACCG CGACAACACG
TGGACGAACC CGGACCGACC GACCATGGGC GCGTTCAAGG TGACCGCACC GGCGAGCGCC
CAGAGCGGCA CGGCGACGCT CGAGCGGAAC GCCTACTTCT GGAAGACGGA CCCGGACGGC
CGCCAGCTGC CGTACGTCGA CAAGATCCAG GTGCAGGTGC TCGACCAGTC GGCACTCGAC
CTGCGGGCCG CCAACGGCGA CCTCGACTTC CAGGGCTACT ACCTCGGCTA CAGCACCACG
GAGACGTACC TGGCGAACGC GGAGAGCCGC GGTTTCGAGG TGCTGCGCTG GACGGACACG
TGGTCGCTGC TCTCGCTGTG CTTCAACCTG TCGCACCAGA ACGAGGCGCT GCGTGAGGTG
TTCCTGCTGC GCGACTTCAG GTTCGCGATG TCGCACGCGA TCAACCGCGA CGAGATCAAC
TCCACGCTCC TGGGCGGCCT CGGCATCATC CGGAACCCCG TGGCTCCCGA GGGCACCGAG
TACGGCGTGG ACGGCAGCGG CCAGACGGCG ATCGAGTACG ACGTCGACCG GGCGAACGAG
CTGCTCGACG GCCTCGGTCT GGCGCTCGCG GGCGACGTGC GGGCGCTCCC GGACGGGACG
CCGCTCGAGC TCACGCTGCT GTACATGGAC GACAACCAGG GCATGTCGCG CGCCGACGCG
TTCGGCATGG TGCAGGAGAT GTGGGCCGCC GTCGGCGTCC GGCTGAACCT CAGACCCGTC
GACTCGACGC TGTACGCGCA GCTGCGGCTC GCGAACGACT TCGACGTCGA CGGCACGTCG
ATGATCGAGG AGGACTTCGA CCTCGAGCCC GTCTGGTTCG TGCCGACCGG CGGCAACAGC
CACACCGCCC CGGGCTTCGG GCTCTGGTAC TCGACGAGCG GTGCCGACGG GATCGAGCCG
CCGGACGAGT TCAAGCAGCT CCTCGCGAAC TGGGACGCGC TCCGCTCGGC GCCCACCGCG
GACGACCGGG TCGCATCCGG GCAGGAGATC ATGCAGGCCC ACAACGACAA CGTGTACGTG
ATCGGCCTCA TGAAGCTGCC GTTCCAGCCG GTCGTCGTGA ACAGCTCGCT CAAGAACGTG
CGGGACGACG CCCCGAAGAT GTCGTTCTAC TACGGCCGCG AGGGCATCAC GAAGACCGAG
CAGATCTTCT TCGAGTAG
 
Protein sequence
MEKTLAAMTR RGFLAVGSAG LGGAALAACT SSSETPEFAA DTDALESPML AELVAAGSLP 
ELAERLPATP MVVEPIEGTG AFGGTLQRAQ TDATATGVMQ SFAPTGLLEW NVASDASQES
LAESYEISDD NRVYTFTLRE GLKWSDGEPF TSADLAFAIE NWLGNATLVP VPPFWYSDVD
QQLPMFDAPD ERTVVIEFRE PFSLFEKYMC HPGVSTQFIK PKHYLEQFHP DFADQADVDA
ASAAAGFDSW DQYFADRDNT WTNPDRPTMG AFKVTAPASA QSGTATLERN AYFWKTDPDG
RQLPYVDKIQ VQVLDQSALD LRAANGDLDF QGYYLGYSTT ETYLANAESR GFEVLRWTDT
WSLLSLCFNL SHQNEALREV FLLRDFRFAM SHAINRDEIN STLLGGLGII RNPVAPEGTE
YGVDGSGQTA IEYDVDRANE LLDGLGLALA GDVRALPDGT PLELTLLYMD DNQGMSRADA
FGMVQEMWAA VGVRLNLRPV DSTLYAQLRL ANDFDVDGTS MIEEDFDLEP VWFVPTGGNS
HTAPGFGLWY STSGADGIEP PDEFKQLLAN WDALRSAPTA DDRVASGQEI MQAHNDNVYV
IGLMKLPFQP VVVNSSLKNV RDDAPKMSFY YGREGITKTE QIFFE