Gene Bcav_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0574 
Symbol 
ID7861037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp635834 
End bp636970 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content72% 
IMG OID643864654 
Productcitrate synthase 
Protein accessionYP_002880599 
Protein GI229819073 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG CAGATCCGCA GGCGAAGGAG ATCCACAAGG GGCTGGCCGG CGTCGTCGTC 
GACACCACCT CGATCTCCAA GGTGGACCCC GACACGAACT CCCTGCTGTA CCGCGGGTAC
CCGGTGCAGG ACCTGGCGGC CCGGGTGTCG TTCGAGGAGG TCGCGTACCT GCTCTGGCAC
GGCGAGCTCC CGACGCCCGA CGAGCTCCAG GCCCAGAACG CGACCGAGCG GCTCCAGCGC
GACCTGGACC CCGACGTCCG CGACGCGATC CTCGCCCTCC CGACGACGGC GCACCCGATG
GACGTCGTGC GCACCGCCGT CTCGGTGCTG GGAGCGACCG ACCCCGATGC GGAGAACCTC
GACCCCGACG CGCTGCAGGC CGCCTCGCTG CGCCTGTTCG CGCAGCTGCC GGCGATCGTC
GCCCTGGACC AGCGCCGCCG GCTCGACCTG CCGGAGGTGG CGCCGCGTGC GGATCTCGGC
TGGTGCGAGC ACCTGCTGTA CCTGACGTTC GGGCAGGTGC CGGACGCCGT CGTCGTCGAC
GCCTTCTCCG TGTCGATGAC GCTGTACGCG GAGCACTCGT TCAACGCCTC GACGTTCACG
GCGCGGGTGA TCGCCTCGAC GCTCTCCGAC CTGTACTCGG CGGTGACCGG CGCCGTCGGC
GCGCTCAAGG GGCCGCTGCA CGGCGGCGCG AACGAGGCGG TGATGCGCAC GTTCGCCGAG
ATCGGCACGG CCGACGACGC CGCCGGTTGG CTCGCCGATC GCCTGGCCGC CAAGGGCAAG
GTGATGGGCT TCGGGCACCG CGTCTACAAG CACGGCGACT CCCGGGTCCC GACCATGCGC
GAGGCGCTCG TGCGGATGGT CGACCACACC GGGCGCACGG AGCTCATGGC GCTGTACGCC
GCGCTCGAGG ACGCCATGGC CGAGCGCACC GGCATCCTGC CGAACCTCGA CTACCCCGCG
GGCCCGGCGT ACCACCTCAT GGGGTTCGAG ACGGCGACGT TCACCCCGCT GTTCGTGGCG
AGCAGGGTGA CGGGGTGGAC GGCGCACATC ATGGAGCAGC TCGCCTCGAA CGCGCTCATC
CGGCCGCTGT CGGAGTACGT GGGACCGGAG CGGCGCGAGG TGCCGGAGCG CCCCTGA
 
Protein sequence
MTDADPQAKE IHKGLAGVVV DTTSISKVDP DTNSLLYRGY PVQDLAARVS FEEVAYLLWH 
GELPTPDELQ AQNATERLQR DLDPDVRDAI LALPTTAHPM DVVRTAVSVL GATDPDAENL
DPDALQAASL RLFAQLPAIV ALDQRRRLDL PEVAPRADLG WCEHLLYLTF GQVPDAVVVD
AFSVSMTLYA EHSFNASTFT ARVIASTLSD LYSAVTGAVG ALKGPLHGGA NEAVMRTFAE
IGTADDAAGW LADRLAAKGK VMGFGHRVYK HGDSRVPTMR EALVRMVDHT GRTELMALYA
ALEDAMAERT GILPNLDYPA GPAYHLMGFE TATFTPLFVA SRVTGWTAHI MEQLASNALI
RPLSEYVGPE RREVPERP