| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0546 |
|---|
| Symbol | |
|---|
| ID | 7857912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 601655 |
|---|
| End bp | 602461 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643864626 |
|---|
| Product | protein of unknown function DUF990 |
|---|
| Protein accession | YP_002880571 |
|---|
| Protein GI | 229819045 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.425776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.946083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCAGC TCCACCTCTT CGGTCGCCTG TTCGCGCTGA ACGTGGGCGT GACGTTCCAG
TACCGGGGCG AGTTCCTCAT CATGCAGATC GGGAACCTGA TCGTGCCGAT CACGTCGCTG
CTGGTCTGGC AGGCGGCCCT GGCCTCGGGC GCCCCGCTCC CGGTCGACGG CGAGTTCCTG
GTGGCGTACT TCCTGCTCGT GAGCGTCGTC GGCATGCTGA CCGCGTCCTG GACGGCGTTC
TACCTGGCGG CGTCGATCCG TGACGGCGCG CTCAACCGGT GGCTCATCCG GCCGGCGTCG
ACCCACCTGG ACGCGGTGGC GAACAACGTG GGCGAGAAGG TCGTCAAGCT CGTCATCATC
GTGCCGCTGA TCGCTGCCCT CGCTCTGCTG CTCGGTGATC GGATCGCCCT GCCCTCGGAC
GCCGGCCGGT GGCTCCTGTT CGCGGTCGCC GTCGTCCTCG CCGCCGGGAT GCGGCTCGCT
CTCGACATCA TGATCGGCTC GCTGGCGTTC TGGTTCGAGG ACGTGCAGGG CTTCATCCGC
GCGCTCGCCG TCATCACCCC GGTGCTGTCC GGGGCCGTGG TGCCGCTCGC GCTCATGCCG
CCCGGGATCG CCGCGGTGAC GGCGGTGCAG CCGTTCCGGT TCATGCTGTC CTACCCGATG
GAGGTGCTGC TGGCGGATCC CGCGGGCGGG CCGGGCGGCC TCACCGCCGG CTTCGCGCTC
CAGGTCGGCT GGCTGGCGGT CTTCGTGGCC GGTGCCGCGG GCGTGTGGCG ACTCGGGTTG
CGCTCCTACG CCGCGGCGGG TGCCTGA
|
|---|
| Protein sequence | MRQLHLFGRL FALNVGVTFQ YRGEFLIMQI GNLIVPITSL LVWQAALASG APLPVDGEFL
VAYFLLVSVV GMLTASWTAF YLAASIRDGA LNRWLIRPAS THLDAVANNV GEKVVKLVII
VPLIAALALL LGDRIALPSD AGRWLLFAVA VVLAAGMRLA LDIMIGSLAF WFEDVQGFIR
ALAVITPVLS GAVVPLALMP PGIAAVTAVQ PFRFMLSYPM EVLLADPAGG PGGLTAGFAL
QVGWLAVFVA GAAGVWRLGL RSYAAAGA
|
|---|
| |