Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0542 |
Symbol | |
ID | 7857907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 597512 |
End bp | 598144 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864621 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880567 |
Protein GI | 229819041 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.669667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCG AGCTCTCCAC CTACCATCGG GGAGTCGCCG CGGCCAACCG TGCGGCGATC CTCGACGCGG CCATGGCCCT GTTCCTCGCG TCCGGCTACG ACCGCACCTC GCTGGCGAGC GTCGCCGAGA GCGCGGGGGT GTCCAAGGCG ACGCTGTTCA AGCAGTTCCC GACGAAGGCG GAGCTCTTCG AGGCGACGGT GCTCGCGGCG GGCGGCACAC CTGGTGGGGA GCTCGTGGAT CCGCCGCCGG GAGACTTCCA TGGCGGCCTG GTCACACTGG GCCTCGCGTA CGCGGAGCTG CTGACACGCC CCGGGATGGA GGACCTGATC CGCGTCGTGA TCGCCGAGGC CCCGCGGTTC CCGGAGCTGC GCGAGCAGAC GTTCGACTTC GGCACGCTGC CCGTGCTCGC GGCGCTGGGG CGATATCTCC GGGCGGAGCA CGCCGCGGGC ACTGCCGACG TGGACGACCC GGACGCGGCC TCGGCGCAGT TCCTCGGGAT GATCTCCACC GTCGTCTTCT GGCCTCGCCT CGTCCACGGC AACTGGTCCC TCAGCGACGA GGAGACGCTT CGCGTGGTGG ACGACGCGGC CCGGACGATG GCCGCGCGCT ACGGCGTGGC CGTGGGCAGC TGA
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Protein sequence | MPRELSTYHR GVAAANRAAI LDAAMALFLA SGYDRTSLAS VAESAGVSKA TLFKQFPTKA ELFEATVLAA GGTPGGELVD PPPGDFHGGL VTLGLAYAEL LTRPGMEDLI RVVIAEAPRF PELREQTFDF GTLPVLAALG RYLRAEHAAG TADVDDPDAA SAQFLGMIST VVFWPRLVHG NWSLSDEETL RVVDDAARTM AARYGVAVGS
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