Gene Bcav_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0533 
Symbol 
ID7857898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp588036 
End bp588698 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID643864612 
Producthypothetical protein 
Protein accessionYP_002880558 
Protein GI229819032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.521375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAG CCGCCGGGCG AACCCTCCTC GTCGGTTACG GTGACGCAGT GACGAGTGCC 
CCCACCGACG AGGCCGCGCG CCGCCGCGCC GCCCGACGAC GTCACCTCCA GCAGCGCCAG
ACCGTCATCT TCGGCGGGCT GCTCGCCGTC CTCGGCGTCG TCGCCCTCGC GGCCGCCGGT
GTGTTCACGG GGATCCTGCC CTCCCCGATC GACCCGCCGT TCTCGACGCC CGAGCCCACC
GACACGGCGC TGCCGCCCCC GTGCCCGGCT GCCGACGCGC TCCCCGTCGC GTTCAGCGAG
GTGACCGTCA ACGTGTACAA CGGCACCACG CGCGCAGGCC TGGCCGGGTC CACGGCCGAG
CAGCTCGCGG CGCTCGGCGT GCTCATCAAC TCCGAGCTCA ACAACCCGGG CGGCCACTAC
GAGGGCGTCA CGGACATCCA GGTGGGCGCC GCCGGCGTGA CCGCCGGGTA CACGATCGCG
GCCCTGTTTC CCGAGGCCAC GATCACGCTC GAGACCAACC GCACGGACGC CGCCGTCAAC
GTGGTGCTCG GCGACGGGTT CGAGGCGATG AGCGACCCGG CCGAGGCCGC CCTCGACCCC
GAGACGCCGA TCGCCGCGCC GGCCGGGTGC GAGCCGGTGC CGACGCCCGA ACCCTCGTCA
TGA
 
Protein sequence
MWKAAGRTLL VGYGDAVTSA PTDEAARRRA ARRRHLQQRQ TVIFGGLLAV LGVVALAAAG 
VFTGILPSPI DPPFSTPEPT DTALPPPCPA ADALPVAFSE VTVNVYNGTT RAGLAGSTAE
QLAALGVLIN SELNNPGGHY EGVTDIQVGA AGVTAGYTIA ALFPEATITL ETNRTDAAVN
VVLGDGFEAM SDPAEAALDP ETPIAAPAGC EPVPTPEPSS