Gene Bcav_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0481 
Symbol 
ID7861865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp536870 
End bp537673 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content72% 
IMG OID643864559 
ProductABC-2 type transporter 
Protein accessionYP_002880506 
Protein GI229818980 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CAACTGTGCC CGCCGGCCCC CGATCCCGCC GCGGCGGCAT GCCCGGCCTC 
GGCCGGCTCG TCCGCACGGA GGCCAAGCTG TTCGTGCGCA GCCCCGGCGA CGTGTTCTTC
GCGCTGATCT TCCCGACGGT CCTCCTCGTC GCCGTCGGAT TCGTCATCCC CGGGATGCGC
GAGACGATCG TGGAGCCCGG CTCGCCGTAC GACGGCCTCC AGGTCATCGC GACCTACGCC
CCGGTCGCGC TCGCCGCGGC GGCCGCGACG GCGTCCCTCA TGTCGTTCCC GGTCGTCATC
GCCACGTACC GGGCGCAGGG CGTCCTGCGG AGGCTCTCGA CGACGCCGAT GCGTCCCCAG
GGCGTGCTGC TCGCTCAGGT GACGATCGCG ATCGTCGTCA TCGCCGTCGC CGCCGCACTC
GCGATCGCCG CCGGGTTCCT GGCGTTCGAC CTGCCGGTGA TCGACAACCC GCTGATGCTC
GCCGTCGGCG TCGCCCTCTC CGCGCTCGCC TGCCTGGCGA TCGGCATGCT CGTCGCGGCG
ATCGTTCCCA CGATCTCGCT CGCCAACGCG GTCGCGTCGC TGCTCTACTT CCCGCTGCTC
TTCCTCGGTG GGATGTGGCT GCCGCTGCCG CTCATGCCCG ACGGTCTGGC GAGAGTGGCG
TCCTTCTCCC CGCTCGGCGC CGGAGTCGAG GTCATGAGCG CTGCGTGGAT CGGGGCACCC
GTCCCCGGGG CGCAGGTCCT CGTGCTCCTC GCCTACCCCG TGGTGCTGCT CCCGATCGCC
GCGAAGGTGT TCCGCTGGAG CTGA
 
Protein sequence
MTTTTVPAGP RSRRGGMPGL GRLVRTEAKL FVRSPGDVFF ALIFPTVLLV AVGFVIPGMR 
ETIVEPGSPY DGLQVIATYA PVALAAAAAT ASLMSFPVVI ATYRAQGVLR RLSTTPMRPQ
GVLLAQVTIA IVVIAVAAAL AIAAGFLAFD LPVIDNPLML AVGVALSALA CLAIGMLVAA
IVPTISLANA VASLLYFPLL FLGGMWLPLP LMPDGLARVA SFSPLGAGVE VMSAAWIGAP
VPGAQVLVLL AYPVVLLPIA AKVFRWS