Gene Bcav_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0423 
Symbol 
ID7860682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp473037 
End bp474035 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content77% 
IMG OID643864500 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002880448 
Protein GI229818922 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCT CCCGCACCGG GCGGAGCGTG CTCGTGATCG GAGGCGGCGT GCTCGGGTCC 
GCCGTGGCAG CGAGCGTCGC CGTCCGTGGC CATGACGTCA CGCTGGTGAC CGATGAACCC
GGGCTCGCGA CGCGCGTCGG TCTGGCGAGC TTCGCCTGGG TGAACACCGC CGGCTCGCTC
CCGGACGACT ACCGGGAGCT CAGGTCGGAC GCGCGGGCGG TCCACGCCGA CCTCTCGGCG
AACGGGGACG CGTGGTTCGC GCAGACCGGG TCCGAGGTGG GGACCGAGCG GACGGCGGAG
GACGGCTGGG TCGACGTCGC GCGCTTCGTG GCCGCTCAGC GCGCGAGGGT GGTGGCCCGG
GGCGGCTCGG TCCGGACCGG CGTCCGCGTG CGCGACCTGC GCCGGACCTC TCGCGGGCTC
ACCGCGACGG CCGTCCCGCT CGGCGGAGCG GAGGGCCAGG ACGTCGCCGA GCTGCGCCCG
GACCGCGTCG TCGTCGCGGC AGGCACCGGC ACCGCGGAGC TCCTCCGCGG CCTCGGCCCG
GTGTCTCGAC GCGTCGGGAC GGCCACAGGG CCGCGCGGTT TCCTGGCACG CGTGCGGCTC
GCCGAGCCGC TGCCGGTCGA CGGCGTCGTC GTCCGCGACG ACCTCCAGCT GCGCCCCGAC
GGCCCCGGCC GGCTCGCCGT CCAGAGCCTG CGGCTCGAGG AGGCGCTGCG CGCCGGCGGC
GAGTCCGCGA CGCCGGCGAC GGTGTGGCCG CATCTGCGCG CGGACCTCGA GCGTGCCCTC
GGCACCGATG TGCCGGAGCA GGCGCTCCTC CGCGTCGACG AGGCCGCGAG GCCCGTGTCC
ACCGACGGGC TCCCCGTCGT CGGCCCGGTC GAGGCCGACG TGCACGTCGT GCTCACCCAC
AGCGGCGTGA CACTCGCTCC GCTGCTCGCC GAGCTCGTCG CCCGTGATCT GGACGGCGAC
GCCGACGCCG GCGCGCGCCT CCGCCCGTAC CGCCCCTGA
 
Protein sequence
MPASRTGRSV LVIGGGVLGS AVAASVAVRG HDVTLVTDEP GLATRVGLAS FAWVNTAGSL 
PDDYRELRSD ARAVHADLSA NGDAWFAQTG SEVGTERTAE DGWVDVARFV AAQRARVVAR
GGSVRTGVRV RDLRRTSRGL TATAVPLGGA EGQDVAELRP DRVVVAAGTG TAELLRGLGP
VSRRVGTATG PRGFLARVRL AEPLPVDGVV VRDDLQLRPD GPGRLAVQSL RLEEALRAGG
ESATPATVWP HLRADLERAL GTDVPEQALL RVDEAARPVS TDGLPVVGPV EADVHVVLTH
SGVTLAPLLA ELVARDLDGD ADAGARLRPY RP