| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0295 |
|---|
| Symbol | |
|---|
| ID | 7858987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 317397 |
|---|
| End bp | 318566 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643864372 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002880322 |
|---|
| Protein GI | 229818796 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.856795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTCGT GGGCGGGCGT GGTTGTCCTG ACCGCGCTGA CCGTGGCGGG TGCCTTCGAC
GCCACCGGCG TGCTCCCGCT CGGTGGCGGG CTCGACGTTG TCGTCGCTCT CGCCGCGCTG
GCGCTCGTCC CGTTCCTCTG GACCCGGCGC CAGCTGCCCG TGGCGTACGC CCTGGCCGCC
CTGGCGGTGC TCGGGCCGAC CGCCACGCCG GCCTCGACCG TCGCTGTGCT CGCGATCGCG
CGTTCGCGCT CGGTCCGGAC GGCGCTGCCG GTCGCCGTCG TCGGCTTCGC CGCGCACGCG
GTGCAGGGCC TGTGGCGGCC GATCCCCCTG CCGTACGGGT GGTGGCTGCT CTGCGCTGCC
GCCGTGTTCG CGGCACTGCT CGGATGGGGC GCGTACTGGA AGGCGCGCGC CGAGCTCCTC
CTCTCGCTCC GTGAGCGGGC CCGGCGTGCG GAGCGGGACC AGGCGGAACG CGTCGAACGC
GCCCGCCACG ACGAGCGCAC CCGGATCGCC CGCGAGATGC ACGACACGCT GGCCCACCGG
CTCACCCTCA TCGCCGCCAC GGCCGGGGCG CTCGAGTACC GCCCGGACGC GCCGCCGGAG
CAGGCGGCGG CCGCGGCGGC GCGGGTGCGC GACGCCGTGA GCGGCGCGCT CGATGACCTG
CGGGGGATCC TGCGCCTGCT GCGCGCGGGG CCGGACGAGC TCCGACCTGC GCCGGGGTTG
GCGGACCTGG GCCAGCTGGT CGCCGAGGCG CGCGCGGCCG GTGGCGCGGT GCGGTACGAC
GACGGCGGGA CCCTGGACGG CGTGGAGGCG CCGCCCGCGC TCGCGCTCGC CGCCTACCGC
GTGGTGCAGG AGGGCCTGAC GAACGCGCGT CGCCACGCAC CCGACGCGGC CGTGTCGGTG
ACGATCGCGC GGGAGCCGGA CGGGATGCGC GTGGCGGTGG TCGACGACGG CGCCACCGCC
CCTGCCGCGG GCGCGTCGGA CGGCTCCGGC ACGGGACTCG TCGGGCTCGC GGAGCGGGTC
GAGCTGCTCG GCGGAACCCT CGACGTCGGT CCGCGCCCGG ACGGACCCGG CTTCGCCGTC
GTCGCCTGGC TACCGTGGGG CGGGTGGGAA CGAGCATCAG GGTCGCGATC GTCGACGACG
ACGCCCTCGT CCGAGCAGCG CTGCGACTGA
|
|---|
| Protein sequence | MLSWAGVVVL TALTVAGAFD ATGVLPLGGG LDVVVALAAL ALVPFLWTRR QLPVAYALAA
LAVLGPTATP ASTVAVLAIA RSRSVRTALP VAVVGFAAHA VQGLWRPIPL PYGWWLLCAA
AVFAALLGWG AYWKARAELL LSLRERARRA ERDQAERVER ARHDERTRIA REMHDTLAHR
LTLIAATAGA LEYRPDAPPE QAAAAAARVR DAVSGALDDL RGILRLLRAG PDELRPAPGL
ADLGQLVAEA RAAGGAVRYD DGGTLDGVEA PPALALAAYR VVQEGLTNAR RHAPDAAVSV
TIAREPDGMR VAVVDDGATA PAAGASDGSG TGLVGLAERV ELLGGTLDVG PRPDGPGFAV
VAWLPWGGWE RASGSRSSTT TPSSEQRCD
|
|---|
| |