Gene Bcav_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0267 
Symbol 
ID7860061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp289977 
End bp290732 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID643864344 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002880294 
Protein GI229818768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.614895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00323328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGA CCGCCGGCCC CGAGACGGGC AGCGCCCCGA CGGGGCTGCG CGAGCGACGC 
CGCGAGGAGA CCCGCGCGGC ATTCGCCCAC GCGGCGTTCG AGCTCGCCTC CGAGCGCGGC
CTCGACGGCT TCACGATCGA CGAGCTCGCC GAGGCGACCG GCCTCGCACG CCGCACCTTC
TTCAACCACT TCACGTCGAA GGAGGAGGCG GTCGCGCACG TCGTCGTCCT CAAGGTGCGC
GAGGTGCTGG CCGTGATCGC CGACTCCCAC GAGGAGCACG GCGAGCCCGA GGAGCACGAG
GGTGACGACG TGGACGACGA CGCGCACGTC GCCGCCCTGA CGTGCCGCCT CCGGACGAGG
TACGCGGGCG ACCTGGCGGC CACCCTGGGA GCCGTCGACG AGGTGACGCG GTCGCTGCTC
GCGCCCGACG TCCTCACCAC GCTCCGTGCC TTCGCGCAGC TCGCCGAGCG GCACCCACAG
CTCGTCCCGC ACCTGTTCAC CGTCGAGAAC GACGCGCGCA CACAGGCCGC CGAGCTCCTG
CGCACGCCGG AGCACGGCGG GCTCACCGAC CTCCAGGCCC ACCTCGTACC GGGCGCCGTC
ATCAGCACCA TCGCGCCGGT CGTCGGCGGC GAGCTCCTGC TCGTCGAGCT CGACGGCGAC
GCACCGGGCG CCATCACGAC CGACGAGCTC GTCGGTCAGC TCATCACGTT CCTCACCCGC
GGCATCGCCG CGGAGCACCC AGCCCAGCCC GTCTGA
 
Protein sequence
MTTTAGPETG SAPTGLRERR REETRAAFAH AAFELASERG LDGFTIDELA EATGLARRTF 
FNHFTSKEEA VAHVVVLKVR EVLAVIADSH EEHGEPEEHE GDDVDDDAHV AALTCRLRTR
YAGDLAATLG AVDEVTRSLL APDVLTTLRA FAQLAERHPQ LVPHLFTVEN DARTQAAELL
RTPEHGGLTD LQAHLVPGAV ISTIAPVVGG ELLLVELDGD APGAITTDEL VGQLITFLTR
GIAAEHPAQP V