Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0267 |
Symbol | |
ID | 7860061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 289977 |
End bp | 290732 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643864344 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880294 |
Protein GI | 229818768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.614895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00323328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACGA CCGCCGGCCC CGAGACGGGC AGCGCCCCGA CGGGGCTGCG CGAGCGACGC CGCGAGGAGA CCCGCGCGGC ATTCGCCCAC GCGGCGTTCG AGCTCGCCTC CGAGCGCGGC CTCGACGGCT TCACGATCGA CGAGCTCGCC GAGGCGACCG GCCTCGCACG CCGCACCTTC TTCAACCACT TCACGTCGAA GGAGGAGGCG GTCGCGCACG TCGTCGTCCT CAAGGTGCGC GAGGTGCTGG CCGTGATCGC CGACTCCCAC GAGGAGCACG GCGAGCCCGA GGAGCACGAG GGTGACGACG TGGACGACGA CGCGCACGTC GCCGCCCTGA CGTGCCGCCT CCGGACGAGG TACGCGGGCG ACCTGGCGGC CACCCTGGGA GCCGTCGACG AGGTGACGCG GTCGCTGCTC GCGCCCGACG TCCTCACCAC GCTCCGTGCC TTCGCGCAGC TCGCCGAGCG GCACCCACAG CTCGTCCCGC ACCTGTTCAC CGTCGAGAAC GACGCGCGCA CACAGGCCGC CGAGCTCCTG CGCACGCCGG AGCACGGCGG GCTCACCGAC CTCCAGGCCC ACCTCGTACC GGGCGCCGTC ATCAGCACCA TCGCGCCGGT CGTCGGCGGC GAGCTCCTGC TCGTCGAGCT CGACGGCGAC GCACCGGGCG CCATCACGAC CGACGAGCTC GTCGGTCAGC TCATCACGTT CCTCACCCGC GGCATCGCCG CGGAGCACCC AGCCCAGCCC GTCTGA
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Protein sequence | MTTTAGPETG SAPTGLRERR REETRAAFAH AAFELASERG LDGFTIDELA EATGLARRTF FNHFTSKEEA VAHVVVLKVR EVLAVIADSH EEHGEPEEHE GDDVDDDAHV AALTCRLRTR YAGDLAATLG AVDEVTRSLL APDVLTTLRA FAQLAERHPQ LVPHLFTVEN DARTQAAELL RTPEHGGLTD LQAHLVPGAV ISTIAPVVGG ELLLVELDGD APGAITTDEL VGQLITFLTR GIAAEHPAQP V
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