Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0257 |
Symbol | |
ID | 7860051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 280350 |
End bp | 280901 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864334 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880284 |
Protein GI | 229818758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.115958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC GGCTCCGCAC CCGCGAGGCG CTCCAACGCA GCGCTCTCGA CCTGTTCGAG CGCCAGGGCT ACGACGCCAC GAGCGTCGCC CAGATCGCCG TCGACGCCGG CGTCACACCC ATGACGTTCT TCCGCCACTT CGCCGCCAAG GAGAACGTGC TGCTGGACGA CCCGTACGAC CCGGCGATCG CCGACGCCGT CGCCGCAGAA CCGCTGTCAC TCCCTCCCCT GGTCCGCGCC GTCCGGGGTC TCCGGCGGGC GTGGGCCCAT GTCCCCGAAC CCGAGGACGA GCACACCCGG CGGCGCGTGC GCATCGTCGC CGCCACGCCG TCGCTCCGGG GCGCCGTCTC GCGCAACAAC GCCGAGACGG AGCGGGTGAT CGCCGACGGC CTGCTCGCCG GCGGCGCCGA ACCCCTCGCG GCCCAGGTAG CGGCCGCCGC CGTCATCGCG GCGCTGACCG CCGCGCTGTA CGCCTGGGCC AGCGCCGACG GTCGCAGCCT CGCCGACGCC GTCACCATCG CCCTCGACAC GTTGGAGCAC GCCGATGGCT GA
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Protein sequence | MTRRLRTREA LQRSALDLFE RQGYDATSVA QIAVDAGVTP MTFFRHFAAK ENVLLDDPYD PAIADAVAAE PLSLPPLVRA VRGLRRAWAH VPEPEDEHTR RRVRIVAATP SLRGAVSRNN AETERVIADG LLAGGAEPLA AQVAAAAVIA ALTAALYAWA SADGRSLADA VTIALDTLEH ADG
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