| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0228 |
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| Symbol | |
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| ID | 7860022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 244592 |
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| End bp | 249007 |
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| Gene Length | 4416 bp |
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| Protein Length | 1471 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643864305 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_002880255 |
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| Protein GI | 229818729 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.406446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGTG AACGGAGCGA GCAGCGGGCC GGACCCGCGG GCACGCCCGG ACGCCGCCGC
CCGAACCGCC GCCGCGGCCG CGGTCAGGGA ACCGGCCCTC GGGAGCGTCG CCCGGCCCGC
CCGGCGTGGC GGCCGTACTC GGAGGAGCAG CTCGCCGTCC GACGCGCTGC GCTCCCGACG
CTCGCGTTCC CGCCGGACCT CCCGGTCTCC GCACGCCGGG ACGACATCGC GGCGGCGATC
CGCGACCACC AGGTCGTCGT CGTCGCGGGC GAGACCGGCT CCGGCAAGAC GACGCAGCTC
CCGAAGATCT GCCTCGAGCT CGGCCGCGGG ATCACCGGCA CGATCGGACA CACACAGCCC
CGGCGGATCG CCGCGCGGAG CGTCGCGGAG CGGATCGCCT CCGAGTGCGA CGTCGAGCTC
GGCGGCGCCA TCGGCTACCA GGTGCGCTTC ACCGACCACG TCGGCCCGAC GACGCTCGTC
AAGGTGATGA CGGACGGCAT CCTGCTCAGT GAGATCCAGC GGGATCCGAC CCTCTCCCGG
TACGACACGA TCATCGTCGA CGAGGCCCAC GAGCGGTCCC TCAACATCGA CTTCATCCTC
GGCTACCTGC GCCGCCTGCT GCCGCGCCGC CCGGACCTCA AGGTCATCAT CACGTCGGCC
ACGATCGACT CCGAGCGGTT CGCCGCGCAC TTCGCGCAGC GCGACGGCGT CGTGGTCCCC
CGGATCGGCG ACCCGGGGAC GCCGGCCCCG GTCATCGAGG TCAACGGCCG CACGTACCCG
GTGGAGATCC GCTACCGGCC CCTCGTCCCC GGCGAGGAGG ACGAGGAGCC GGACGACGGC
GCCCCGCGCC CGCCGCACGA CGCCCTCGAT CTCGATGTGC TCGACGACGC CGACCTGCTC
GCCGGGCTCG AGACCGACGA CGCGCGCGTC CTCGCCGCGC TCGAGGCGGC GACCGCCCCG
GACGCCGACC CCGCGAGCGC CGCCGGCCGC GGCCGGGCGA CGCACACCGC GCCGACGGCG
ACGAGACGCG GGACGAGGCG GACGCCGTCG TCGGGGCCGC AGCAGGCGGA CGAAGAGCTC
GACCAGCCGA CGGCGATCTG CCGCGCCGTC GACGAGCTGA CGGCGCTCGG CCCGGGCGAC
GTGCTCGTGT TCTGCTCCGG CGAGCGGGAG ATCCGCGACG CCGCCGACGC GCTGGCGTCT
CACCTCGGCA CCCGGTACAC GGCACCCGGA GCGCGGAACA CCGCACCGGG CGCCGTCGAG
GTCCTCCCGC TGTACGCGCG CCTCAGCGCG GCGGAGCAGC ACCGCGTGTT CGCCCCGCAC
CCGTACCGGC GCGTGGTGCT GGCGACGAAC GTCGCCGAGA CGAGCCTCAC GGTGCCCGGG
ATCCACTACG TGGTCGACAC CGGCCTCGCC CGCATCTCGC GCTACTCGCA ACGCACGAAG
GTGCAGCGGC TGCCGATCGA GCCGATCTCC CAGGCCAGCG CGAACCAGCG CTCCGGGCGG
TGCGGACGCG TGGCGGACGG CGTCGCGATC CGGCTGTACT CCCGCGGCGA CTTCGACCGC
CGCCCGGAGT TCACCGAGCC GGAGATCCTG CGCACGTCGC TGGCGAGCGT GGTGCTGCAG
ATGGCAGCGC TCGGGCTCGG CCGGATGGAC GCGTTCCCGT TCGTCGACCC GCCGGACACG
CGCGCCATCC GCGACGGCGT CGCGCTCCTC ACCGAGCTCG GCGCGATCGA GGAGGGCCAG
GGCGACGACG CCGAGGACGT CCGGCTCACC GACGTCGGGA GGCAGCTCGC GCAGCTGCCC
ATCGACCCGC GGCTGGGCCG GATGCTCGTG GAGGCCGGCC GGCTCGGCGT GGTTCGCGAG
GTCATGGTGC TCGTGGCCGC GCTCTCCGTG CAGGACGTGC GCGAGCGCCC GGCGGATCAC
CAGCAGGCGG CGGACGACAA GCACCGCCGG TTCGCCGACC CGACGTCGGA CTTCCTCACG
CTGTACACGC TGTGGACCTA CCTGCAGGAC CAGCAGAAGG CCATGGGCTC GAGCGCGTTC
CGGCGGCTGT GCCGATCGGA GTTCCTCCAC TACCTGCGGG TGCGCGAGTG GCAGGACGTG
CACGCGCAGC TGCGCCAGCT CGGCAAGGGC CTGGGGCTGC GCCCCGAGCC ACGGGCCGAC
GACGCGCCCG CCGGGGTCGG CGACGTGCGC AAGCCGAAGG TCGACTCCGA CGCCGTCCAC
CGCGCGCTCC TCGCCGGCCT GCTCAGCCAC CTCGGGTCGT GGGACGAGCG ACGGCGGGAG
TACGCGGGTG CGCGCGGGTC GCGGTTCGTC GTGTTCCCCG GGTCCTCGCT CGCCCGCAAG
CCGCCGGCGT GGATCGTGGC GGCCGAGCTC GTCGAGACGT CCCGGCTGTT CGCGCGCACC
GCCGCCCGGA TCCAGCCCGA GTGGGCCGAG CAGGCCGGCG AGCACCTCGT GAAGCGCACC
TACTCGGGGC CGTTCTGGTC GGCGAAGCAG GGCGCCGCGA TGTGCCACGA GAAGGTGCTG
CTGTTCGGGG TGCCGATCGT CGCGGACCGG GTGGTCCCGT TCGCGCGCGT CGACCCGGCG
GCGGCCCGGG AGATGTTCCT GCGGAACGCG CTCGTGGAGG GCGAGTGGCG CACGCACCAC
GCGTTCGTGC GTCGGAACGC GGAGGTGCTC GACGAGGCGC GCCAGATCGA GGACCGGGCA
CGGCGGCGCG GCCTGCTCGT CGACGACGAG GCCCTGGTCG ACTTCTTCGA CGAGCGGGTC
CCGGAGTCGG TGACGACGGC GCGCGCGTTC GACGCCTGGT GGAAGGACGC GCGGCGCGCG
GACCCCGACC TCCTCACGTA CACGCTCGAC CTGCTCGTCC CGACCGCGCA CGCCGTCGAC
GACGCCGGGT TCCCGCGCAC CTGGACGCAG GGTGACCTGA CGCTCCCGCT GACGTACCAG
TTCACGCCGG GCACGGATGC CGACGGCGTC ACCGTGCACG TGCCGATCGC CGTCCTGAAC
CGGGTCCGCC CGGCCGGGTT CGACTGGTTG GTGCCCGGTC TGCTCACGGA CCTCGTGACG
GCGACGATCC GGGCCCTGCC CAAGCAGGTG CGCGTGCAGC TCGTCCCGGC ACCCGACGTG
GCGCAGGCCG TCGTCGCCCG GCTCCCGGAC TGGGCGGACG TCGCGCCCGC TCCCGACGGC
GCCCCGTCCT TCCACGAGGC GTTCGCGAGC GCCGTGCGCG AGGTGCGCGA CGTCGTCGTC
CCCGCCGAGG CGCTCGAGGA GGCCGACGAA CGGCTCCCCG CGCACCTGCG GATGACGTTC
CGCGTGCTGG GCGAGCGCGG GCAGGAGCTC GACGAGGGGC ACAGCCTCGT CGCGTTGCAG
CGGCGGCTCG CGGCCCAGGC CCAGTCGGCG GTGCGCTCCG CCGTGCGCGC GGCCCTCGCC
GACGCCTCAC GCACCGCGGC GGTCCCCGCC GGCCCCGTGG CGAGCCCCGA AACCACACCC
ACGACGGCGG AGAGCGGTGA GCAGCAGGGC CGGACGGGCG GCGCCGAGGT CGACACCGTC
CGTACCTGGG CCGACGTCCC CGGCGAGGCC ATCCCCGCCG AGCTCGCCAC GACCGGCCCC
GCCGGCCTCG ACATCCGCGG CTACCCGGCG CTCGTCGTCG AGCCGGATCC CGACGGCGGG
CGGACGCGGG TCGCGTTGCG CGTCCTCGCC GACGCCGAGC GGGCCCGCGC GCAGCACGCC
GACGGCGTCC GCGCGCTCCT GCTCCAGGAG TTCGCCATCC CGACGGCACG GGTGACGTCG
CGCTGGACCG GCCGCGAGGC GCTCACGCTC GCGTCGAGCC CGTACCGCGA CACGGACGCG
CTGGTCCGGG ACGTGCAGGT GGCGGCGGTC GCCCAGCTCA CGGCCGGGAC GGACCTCACC
ACGGTGCGCG ACGCCGCGTC GTACCGCCGG GTCCGCGCGG ACGTGCGGGA TCACCTCGAG
GACGCCGTGT ACGGCGTCGT CGCACGCGTG GTCGAGGCCC TCCAGGCCCA CCGCGAGCTC
GACTCCGCGG TGCGCGCCAG CACGTCGATG GCGCTGCTCG GCACGCTGAC CCAGGTCCGC
GACCACGCCG CGTCGCTGGT GTACGACGGC TTCGTGGCCC GGACGCCCCC GGAGTCGCTG
CGCCACCTCG CGCGCTACCT GCGGGCCGAC GGCTACCGCC TCGCGAAGGC GGCGGAGAAT
CCCGGCCGCG ACGCGACCCT CGCGTGGGAG GTCAGCGAGC TCGAGGACGC CCTGGCCTCC
GTGCGCGCCA CCCATCTGAG CCCGGACCGC GCCGCACGTG CCGAGGCCGT CCGGTGGCAG
CTCGAGGAGC TCCGGGTGTC GCTCTTCGCC CAGCAGCTCG GGACGGCGCA GCCCGTGTCC
GCCAAGCGCA TCCGGACGGC GCTCGCCCAG GTGTAG
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| Protein sequence | MSGERSEQRA GPAGTPGRRR PNRRRGRGQG TGPRERRPAR PAWRPYSEEQ LAVRRAALPT
LAFPPDLPVS ARRDDIAAAI RDHQVVVVAG ETGSGKTTQL PKICLELGRG ITGTIGHTQP
RRIAARSVAE RIASECDVEL GGAIGYQVRF TDHVGPTTLV KVMTDGILLS EIQRDPTLSR
YDTIIVDEAH ERSLNIDFIL GYLRRLLPRR PDLKVIITSA TIDSERFAAH FAQRDGVVVP
RIGDPGTPAP VIEVNGRTYP VEIRYRPLVP GEEDEEPDDG APRPPHDALD LDVLDDADLL
AGLETDDARV LAALEAATAP DADPASAAGR GRATHTAPTA TRRGTRRTPS SGPQQADEEL
DQPTAICRAV DELTALGPGD VLVFCSGERE IRDAADALAS HLGTRYTAPG ARNTAPGAVE
VLPLYARLSA AEQHRVFAPH PYRRVVLATN VAETSLTVPG IHYVVDTGLA RISRYSQRTK
VQRLPIEPIS QASANQRSGR CGRVADGVAI RLYSRGDFDR RPEFTEPEIL RTSLASVVLQ
MAALGLGRMD AFPFVDPPDT RAIRDGVALL TELGAIEEGQ GDDAEDVRLT DVGRQLAQLP
IDPRLGRMLV EAGRLGVVRE VMVLVAALSV QDVRERPADH QQAADDKHRR FADPTSDFLT
LYTLWTYLQD QQKAMGSSAF RRLCRSEFLH YLRVREWQDV HAQLRQLGKG LGLRPEPRAD
DAPAGVGDVR KPKVDSDAVH RALLAGLLSH LGSWDERRRE YAGARGSRFV VFPGSSLARK
PPAWIVAAEL VETSRLFART AARIQPEWAE QAGEHLVKRT YSGPFWSAKQ GAAMCHEKVL
LFGVPIVADR VVPFARVDPA AAREMFLRNA LVEGEWRTHH AFVRRNAEVL DEARQIEDRA
RRRGLLVDDE ALVDFFDERV PESVTTARAF DAWWKDARRA DPDLLTYTLD LLVPTAHAVD
DAGFPRTWTQ GDLTLPLTYQ FTPGTDADGV TVHVPIAVLN RVRPAGFDWL VPGLLTDLVT
ATIRALPKQV RVQLVPAPDV AQAVVARLPD WADVAPAPDG APSFHEAFAS AVREVRDVVV
PAEALEEADE RLPAHLRMTF RVLGERGQEL DEGHSLVALQ RRLAAQAQSA VRSAVRAALA
DASRTAAVPA GPVASPETTP TTAESGEQQG RTGGAEVDTV RTWADVPGEA IPAELATTGP
AGLDIRGYPA LVVEPDPDGG RTRVALRVLA DAERARAQHA DGVRALLLQE FAIPTARVTS
RWTGREALTL ASSPYRDTDA LVRDVQVAAV AQLTAGTDLT TVRDAASYRR VRADVRDHLE
DAVYGVVARV VEALQAHREL DSAVRASTSM ALLGTLTQVR DHAASLVYDG FVARTPPESL
RHLARYLRAD GYRLAKAAEN PGRDATLAWE VSELEDALAS VRATHLSPDR AARAEAVRWQ
LEELRVSLFA QQLGTAQPVS AKRIRTALAQ V
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