Gene Bcav_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0221 
Symbol 
ID7860015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp236713 
End bp237807 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID643864298 
Productprotein of unknown function UPF0118 
Protein accessionYP_002880248 
Protein GI229818722 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00795849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGTCG TGGCCGTCTT CGTCGGGATC CTGTCCTGGT ACGCCCTGGG CTCCCTGCAG 
GGGCTCGGCG TCAACCTCGT CATCGCGTTC TTCGTAGCGC TCGCGCTCGA GCCCGCCGTC
GTGTGGCTGG TGCGCCACGG ATGGCGCCGC GGAGCGGCGG CGGGCGTGGC GCTCCTCGGG
TCGATCATCG TCATCGCCGT CGTGCTCGCC CTGTTCGGGA ACCTGTTCGT GCAACAGCTG
ATCCAGCTGG TCAGCAACCT GCCGGACGTG TACGCCACGA TCCAGGAGTG GGTCGAGGGC
CAGTTCGGCG TCGTCGTGCC GGACTCGGAC GACCTCATCC GCCAGGCGCT CGAGCAGTGG
GGCGACGACG TCGCCTCGGG TGCGCTCGCC GTCGGCGCCG GGATCGTGGG CGGCCTCTTC
GCGGCGTCGG TCATCCTGCT CGTCGCGTAC TACCTCCTCG CGGCCGGCCC GAAGTTCCGG
GCGTCGATCT GCCGGTGGCT GACGCCGAAC CGCCAGGAGG AAGTCCTGCG GATGTGGGAG
ATCACGCAGG TCAAGGTGTC GGACTTCATC AACACGCGCA TCGTGCTCGC TGCGCTGTCG
ACGACGTTCA CGTTCGTCTT CCTGCTCATC ATGGGGACGC CCTACGCGCT CCCGCTCGCC
GTGTTCACCG GCGTCGTCTC CCAGTTCGTG CCGACGATCG GCACCTACAT CGGCGGCGCG
CTGCCCGTCG TCGTCGCCCT CGCTGCCCAG GGCATCGGGT ACGGCCTCGC CGTCACCGCG
TTCATCGTCG GGTACCAGCA GGTCGAGAAC CTCATCTTCT CGCCGAAGGT CTCCGCCCGT
GCGCTCGAGA TGAACCCCGC GGTCTCCTTC GTCGCCGTCC TCGCGTTCGG GGCCGTGTTC
GGGCCGCTCG GCGCATTCCT GGCGCTGCCC ATCGCCGCCA CGATCCAAGC CATCGGGAAC
ACGTACATGC GCCGGCACGA GCTCATCGAC TCCCACATGC TCCGCGACCC CGACTCCCAC
CACGAGGGCC ACGAGGGCCA CGAGGGCCAC GACAGGAAGA AGCCGGGCGA GCCGCACGAC
GCTCCCGCGG GCTGA
 
Protein sequence
MGVVAVFVGI LSWYALGSLQ GLGVNLVIAF FVALALEPAV VWLVRHGWRR GAAAGVALLG 
SIIVIAVVLA LFGNLFVQQL IQLVSNLPDV YATIQEWVEG QFGVVVPDSD DLIRQALEQW
GDDVASGALA VGAGIVGGLF AASVILLVAY YLLAAGPKFR ASICRWLTPN RQEEVLRMWE
ITQVKVSDFI NTRIVLAALS TTFTFVFLLI MGTPYALPLA VFTGVVSQFV PTIGTYIGGA
LPVVVALAAQ GIGYGLAVTA FIVGYQQVEN LIFSPKVSAR ALEMNPAVSF VAVLAFGAVF
GPLGAFLALP IAATIQAIGN TYMRRHELID SHMLRDPDSH HEGHEGHEGH DRKKPGEPHD
APAG