| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0218 |
|---|
| Symbol | |
|---|
| ID | 7860012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 231954 |
|---|
| End bp | 233000 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643864295 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_002880245 |
|---|
| Protein GI | 229818719 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000547055 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTGC TGGGGACACA CACGGCCGGG CTGGGCGAGC TCGTGGCCGA GTCGTTGCGC
GCCGACGTGC GCGCCGAGGT CCTGTACGCG GACGACAGTG CGGCTCTCGT CAGCACCGGC
GCGCCCGAGT CGGCGGTGGC TCAGCTGTCC TATCTCAAGA ACGCGTTCGT CGTGCTCGGC
TCGACCCCGC GCCGCGGTGA CCTCCGGCAG GCGGTCGAGA AGATCGCACG GGCCGTGCCC
GCCTGGGGGC TGCGGCGGAC CGGGCGGCAG TTCCGCCTGA CGTTCTCCGA GGACGGCCGG
CTCGCCGCGG TGCCGGCAGC GAGCCGGGTC AGGCTGGAGA CAGCCGTAGC TCGGGCCACG
GGTGGCAGGT TCACGCCCCG GGGCGGCGGC GCGGTCGAGG AGTACTGGAC GATCACCAGG
CGCGACCTCG ACGAGGTGCT GTTCGCGCGG CGCATCGCCC GGCCGCCGAG GCCGGCGGTC
CCGAAGGGCA GCCTCGCCCC GGAGATCGCC GAGCTGGTGG TCAACGCGGC CGGTCCGGCC
GGCGCGGACG ACGTCGTCCT CGATCCCTTC GCCGGGAGCG GCGCGCTCGT CGCCGCCCGG
GTGCGGAGGC CGTTCCGAAA GGCGATCTGC TCCGACGTCG GGTACGCGGA CGGGACGGTG
CGCCGACTCC CGGAGCTCGC CCGCGCTGCG CGGGTCGTGC AGCTGCCCGA GGATGCCCGG
GTCCTCGCCT CGGTCCCCGA CGGCTCGGTC GACGTCGTCG TGACCGACCC GCCGTGGGGC
GAGTTCGAGA GCGGCCCGGC CCCGGACGAG GAGTTCTTCG CCGCGACGCT CACCAGTATG
CGGCGCGTCC TGCGGCCGCG GGGCCGCCTC GCGATGCTCC TCTCGCGGCG CCTCGTGCGC
GACGTGCGGG CACAGTGGAT CGACCACGGG CTCGTCCCCG AGAAGTCCTT CGACCTGCTG
GTCAACGGGC ACCCAGCGAC CCTCCTCGTG GGGCACCGGG AGGCCGGTCC CGGGCCGGCG
GCCCTCGAGA CCGGCGCCGG CGCTTAG
|
|---|
| Protein sequence | MKVLGTHTAG LGELVAESLR ADVRAEVLYA DDSAALVSTG APESAVAQLS YLKNAFVVLG
STPRRGDLRQ AVEKIARAVP AWGLRRTGRQ FRLTFSEDGR LAAVPAASRV RLETAVARAT
GGRFTPRGGG AVEEYWTITR RDLDEVLFAR RIARPPRPAV PKGSLAPEIA ELVVNAAGPA
GADDVVLDPF AGSGALVAAR VRRPFRKAIC SDVGYADGTV RRLPELARAA RVVQLPEDAR
VLASVPDGSV DVVVTDPPWG EFESGPAPDE EFFAATLTSM RRVLRPRGRL AMLLSRRLVR
DVRAQWIDHG LVPEKSFDLL VNGHPATLLV GHREAGPGPA ALETGAGA
|
|---|
| |