| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0207 |
|---|
| Symbol | |
|---|
| ID | 7860001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 221972 |
|---|
| End bp | 222865 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643864284 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_002880234 |
|---|
| Protein GI | 229818708 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.013285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGAGG TCGACGGTAG GCATGGCGAC ACCGACGGCG AAGGGGTGTC GATCATGGCG
GGCGAGCACG GGGTCGCAGC GTTGACGGAC GGACGGCCCG ACGACGGCGA GCGAGACCGG
CCGTACGTCG TCGTCTCCGT CACGACGTCG GTCGACGGGC GGGTCACGTT CGCACCCGAC
CGGCTCCTCA TGCTCGAGCC GCACTCCTCG GCCTGGCGGG CGCTCGGCGG GGAGTCGGCC
GACCGGGTGC AGGCCGCACG CGCGGCGGAC CTCGAGCGCG AGCACCCGCA CCAGGCGACG
CTCGAGGGCA GCGGCTCACT GGTCCCGCCC GACGCCGGCC CGGTGGGCGG GCTGGACCCG
GTTCCGCCCG AGGAGCGGGA CGCGCTCTAC GCGGACCACC TTCCGGAGGC CGTCGTGGCG
CGGCCGGGGC GCACGAAGTG GTTCACCGTC GTCGACGGCC GCGGGCGCGT GCGCTGGACG
ATGAAGAGCG TCGGCGAGTT CGACGTCCTG GTGCTCGCCT CGCGGGCGAC GCCGATCGAG
TACCTCGGCT ACCTGCGCCG CGAGGGGATC TGCTATCTCG TGGCGGGCGA GGAGCGGGTG
GACCTGGCGG CAGCCCTGCG GCGGATGCGG GAACGGCTCG GCGTCACGAC TCTCGTCTCC
ACGGCGGGCG GCGGGCTCAA CGGTGCGCTG CTCCGGGCCG GCCTCGTCGA CGAGCTCGAC
CTCGTCGTGC TGCCCACGGC GATCGGCGGA GCCGGGACCC CGACGGTGTT CGACGGTCCG
GTGCTCCCGG AGGGCGCCAC GCCCGCCGCG CTGCGCCTGC GTTCCGTGCG GGTCGAGGAC
GACGGCGTGC TGCGGCTCCG CTACCTCGTC GAGCGCGCGG ACGCCGGTCG CTGA
|
|---|
| Protein sequence | MSEVDGRHGD TDGEGVSIMA GEHGVAALTD GRPDDGERDR PYVVVSVTTS VDGRVTFAPD
RLLMLEPHSS AWRALGGESA DRVQAARAAD LEREHPHQAT LEGSGSLVPP DAGPVGGLDP
VPPEERDALY ADHLPEAVVA RPGRTKWFTV VDGRGRVRWT MKSVGEFDVL VLASRATPIE
YLGYLRREGI CYLVAGEERV DLAAALRRMR ERLGVTTLVS TAGGGLNGAL LRAGLVDELD
LVVLPTAIGG AGTPTVFDGP VLPEGATPAA LRLRSVRVED DGVLRLRYLV ERADAGR
|
|---|
| |