Gene Bcav_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0201 
Symbol 
ID7859995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp215951 
End bp217543 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content74% 
IMG OID643864278 
Productbeta-lactamase 
Protein accessionYP_002880228 
Protein GI229818702 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.494145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGG ACGACAAGGG GGCCGTCGTG CCACGAGACG TCGAGACCGT CGCGGCGGAG 
CTCGAGCAGC GCGTGCCGCG TCTGCTGGCC GAGCACGCGA TCCCCGGGGT CGCGATCGGC
GTCTGCGACG CGTCCCGCAT CCTGTGGTCG GCCGGCTTCG GGACGACGAC GGCGGACGGG
TCGCAGCCGA TCACCACCGA CACCACGTTC GGCCTGCAGT CGGGCTCGAA GATGTATACG
GCGACGGCGG TGCTGCGCGC CGTCGGCGAC GGTCTCGTCG ATCTCGATGC GCCGATCACC
GACTATCTGC CCGACTTCCG CGTGCGGACC CGGTTCGAGC CGAACCCGGA GCGGCGCATC
ACGCTGCGGC ACCTGCTCGC CCACACCGCA GGCTTCACCC ACGAGGCGCC GGTGGGGAAC
AACTACGTGG TCGGGAACGC GAGCTTCGCC GCCCACTGCC GCAGCATCGG CGACACGTGG
CTCCGCTTCG ACGTCGGCCA CCACCACGAG TACTCGAACC TCGGCTACGA CCTCGCCGGC
CACGTGCTCG AGCGCGTGAG CGGTGAGCCG TTCCACCGGC ACCTCGAGCG GGCGCTGCTG
GAGCCGCTCG GTCTCGCGCG CACCACCGCC GACGTCGCCA CGCTCAAGGC CGACCGGGAC
CACGCGCTCG GGCACGGGAC GTCGGCGCGG GTGCCGTTCC GGGTCCCGAT GGTCCCGGCG
GGCGGCGTCC ACGCCAGCGT CGACGACGCC TGCCGCTTCG CGCAGCTCCA CCTGCGCGGC
GGCGCCGACC TGCTGCCGAG CGAGCTCGCC GAGGAGATGA CGGCGGTCCC CGGCCACCCG
GAGCGCGACC AGGGCTACGG CCTCGGCGTC GCGCTCATCC GCGTCGGCGA CCTGGTCATC
CGCGGCCACA GCGGCGGCGG CTTCGGCTTC CTGTCCGACA TCTACTGGGC ACCCGAGGCG
GGGCTCGGCG TCGTCGTCCT CACCAACTCC ACGAAGCACC CGCTCCAGTT CCGCCTCGCG
ACCGAGATCC TCCGGGACCT CACCGGGGCG GACCTGGCGC CGCGGCCGGC TGCCCCGACG
GCGCACCCCG ACGGCGGCCC GCGCCCGCCC GCGGCGATCG CGGGCGAGTA CGTCGGCCGG
GTCGGCACCC TCACGCTCGC GGTCGACGGC GACGGCGTGG TCGTGCGGTC GGGCGGGACC
TCGCGCTCGG CGCGGCTCGT GACCCCGCAC GAGCTCGCCG TCGACGGCGA CTCGCCCCAG
CGGTACGTGC TGCGCGACGT CGACGCCGAC GGGCGGCCGG GCATGCTCGA GTCAGCGATC
GACGGCCAGG TCCACCACCG CAACGATCCG CCGCCCGACG CGGAGCCGAC GGCGTCCGGC
CCGTGGAACC GCGACTACTC GATCCGGGAC GGGACCGCCG TCACGCGCAC GCGGCTGAGG
CACGAGGGCG GCCTCGCGTC GATCGACTGG GAGGGTCACC GGCTGCAGCT CGAGCGGCAC
ACGGACGACG TGTGGTTCTC GTCCACAGGA GAGGCTCTCG ACCTCGCGTC CCAGCCGCCG
ACGTACGCGA ACGTCCGGCT CCACCCCCGC TGA
 
Protein sequence
MTTDDKGAVV PRDVETVAAE LEQRVPRLLA EHAIPGVAIG VCDASRILWS AGFGTTTADG 
SQPITTDTTF GLQSGSKMYT ATAVLRAVGD GLVDLDAPIT DYLPDFRVRT RFEPNPERRI
TLRHLLAHTA GFTHEAPVGN NYVVGNASFA AHCRSIGDTW LRFDVGHHHE YSNLGYDLAG
HVLERVSGEP FHRHLERALL EPLGLARTTA DVATLKADRD HALGHGTSAR VPFRVPMVPA
GGVHASVDDA CRFAQLHLRG GADLLPSELA EEMTAVPGHP ERDQGYGLGV ALIRVGDLVI
RGHSGGGFGF LSDIYWAPEA GLGVVVLTNS TKHPLQFRLA TEILRDLTGA DLAPRPAAPT
AHPDGGPRPP AAIAGEYVGR VGTLTLAVDG DGVVVRSGGT SRSARLVTPH ELAVDGDSPQ
RYVLRDVDAD GRPGMLESAI DGQVHHRNDP PPDAEPTASG PWNRDYSIRD GTAVTRTRLR
HEGGLASIDW EGHRLQLERH TDDVWFSSTG EALDLASQPP TYANVRLHPR