Gene Bcav_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0198 
Symbol 
ID7859675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp213990 
End bp214607 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID643864275 
Productpentapeptide repeat-containing protein 
Protein accessionYP_002880225 
Protein GI229818699 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.720346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC GACGAGGCGG CTCACCCGAT CCCGAGACCA CGACCACCGT CCGCGGTGAG 
GACTGGTACG GCCGCGAGGT CGGCGCCGAG CAGTACGCCG GCGTCCGGTT CGTCGATGTC
GACCTCACCG AGGCGTCCAC GCGCGGCACG GTGTTCTCGG AGTGCGTCTT CTCCAACGTC
GCGTTCAACG TGTCGCACCA CGCCTCCACG GCGTTCGTGA ACTGCACGTT CCGCCGCTGC
AACTTCTTCG ACGCGACGTT CACGGGCTGC AAGCTGGTGG GCGCGATGTT CGACGGGTGC
AGCTTCGGGA TCATGAAGGT GGACCGCGGC GACTGGTCGT TCGCCGGGTT CCCGGGCGCC
GACCTCGAAG GGGTCGAGTT CACCGGCGTG CGGCTGCGCG AGTCCGACCT CACCCACGCG
CGGTGCGCGC GCTCGGTGTT CGCGGGGTGC GACCTCTCGG GCTCGTGGCT GCACGGCGCC
GACTTCACCG ACGCCGACCT GCGGGGCAGC GCTCTCGGCG AGATCGATCC GCGGGTCGTC
ACGCTCCGCG GCGCCACGAT CACCGCCGAT CAGGCCATCG CGATCGCCGC GGGGCTCGGG
CTCGTCGTCG ACGTCTGA
 
Protein sequence
MAERRGGSPD PETTTTVRGE DWYGREVGAE QYAGVRFVDV DLTEASTRGT VFSECVFSNV 
AFNVSHHAST AFVNCTFRRC NFFDATFTGC KLVGAMFDGC SFGIMKVDRG DWSFAGFPGA
DLEGVEFTGV RLRESDLTHA RCARSVFAGC DLSGSWLHGA DFTDADLRGS ALGEIDPRVV
TLRGATITAD QAIAIAAGLG LVVDV