Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0171 |
Symbol | |
ID | 7862043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 177285 |
End bp | 177929 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864248 |
Product | protein of unknown function DUF1211 |
Protein accession | YP_002880198 |
Protein GI | 229818672 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.802935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTATG AGAGACGCGG TGAACCGCGC TCGCTGGAGC GGTTCGTGTT CTTCAGCGAC GCCGTCGTCG CCATCGCGAT CACGCTCATC GTCCTGCCGC TGGTGGACAG CGCCCGGGAC CTGCCGCCGG GGACGACGAC GGCGGACTTC CTCGGCGAGA ACGCCTACGC GCTGCTGGCG GCCGGGATCA GCTTCTTCGT CATCGGTGGC TTCTGGTCCG GCCACCGGCG GCTGTTCGAC CGCGCCACCG GACTGGCGCC CGGGGTGCAG CTCCTCAATC TCGCCTGGCT CGCGACGATC GTGCTCCTCC CGCTGGCGAC GGTGCTGGAG GTCTCCGCGG AGCCCGGCGA CCGGCTCGGC GTGCTCCTCT ACGTCGGGAC GATGCTGCTG TCGCTCGTCG TCATCCAGGT GCAGGAGCTG CTGCTCGCGC GGGCCGGCCA GCTCTCGCCT ACACCGACCC GGGGCGATCT CGCGAGCGGG TGGGTCGCCG TCGTCCTCAT GCTCCTCGCC CTGCTGCTCG CCGTCGCGTT CCCTGCGCTC AGCCTGTACC CGCTGCTGCT GCTCGTGCTC ACCGGGCCGC TGTCGCGCCT CGTGCGGCGC CGCGCCGGCG AGGGCCCGCC CGCGGCCGTG GGAGACGCGG AGTAA
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Protein sequence | MTYERRGEPR SLERFVFFSD AVVAIAITLI VLPLVDSARD LPPGTTTADF LGENAYALLA AGISFFVIGG FWSGHRRLFD RATGLAPGVQ LLNLAWLATI VLLPLATVLE VSAEPGDRLG VLLYVGTMLL SLVVIQVQEL LLARAGQLSP TPTRGDLASG WVAVVLMLLA LLLAVAFPAL SLYPLLLLVL TGPLSRLVRR RAGEGPPAAV GDAE
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