Gene Bcav_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0171 
Symbol 
ID7862043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp177285 
End bp177929 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID643864248 
Productprotein of unknown function DUF1211 
Protein accessionYP_002880198 
Protein GI229818672 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.802935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTATG AGAGACGCGG TGAACCGCGC TCGCTGGAGC GGTTCGTGTT CTTCAGCGAC 
GCCGTCGTCG CCATCGCGAT CACGCTCATC GTCCTGCCGC TGGTGGACAG CGCCCGGGAC
CTGCCGCCGG GGACGACGAC GGCGGACTTC CTCGGCGAGA ACGCCTACGC GCTGCTGGCG
GCCGGGATCA GCTTCTTCGT CATCGGTGGC TTCTGGTCCG GCCACCGGCG GCTGTTCGAC
CGCGCCACCG GACTGGCGCC CGGGGTGCAG CTCCTCAATC TCGCCTGGCT CGCGACGATC
GTGCTCCTCC CGCTGGCGAC GGTGCTGGAG GTCTCCGCGG AGCCCGGCGA CCGGCTCGGC
GTGCTCCTCT ACGTCGGGAC GATGCTGCTG TCGCTCGTCG TCATCCAGGT GCAGGAGCTG
CTGCTCGCGC GGGCCGGCCA GCTCTCGCCT ACACCGACCC GGGGCGATCT CGCGAGCGGG
TGGGTCGCCG TCGTCCTCAT GCTCCTCGCC CTGCTGCTCG CCGTCGCGTT CCCTGCGCTC
AGCCTGTACC CGCTGCTGCT GCTCGTGCTC ACCGGGCCGC TGTCGCGCCT CGTGCGGCGC
CGCGCCGGCG AGGGCCCGCC CGCGGCCGTG GGAGACGCGG AGTAA
 
Protein sequence
MTYERRGEPR SLERFVFFSD AVVAIAITLI VLPLVDSARD LPPGTTTADF LGENAYALLA 
AGISFFVIGG FWSGHRRLFD RATGLAPGVQ LLNLAWLATI VLLPLATVLE VSAEPGDRLG
VLLYVGTMLL SLVVIQVQEL LLARAGQLSP TPTRGDLASG WVAVVLMLLA LLLAVAFPAL
SLYPLLLLVL TGPLSRLVRR RAGEGPPAAV GDAE