Gene Bcav_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0115 
Symbol 
ID7859280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp123003 
End bp123497 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content75% 
IMG OID643864192 
Productprotein tyrosine phosphatase 
Protein accessionYP_002880142 
Protein GI229818616 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG GGTCCGCGCC GTTCCGGGTG CTCGTGGTCT GCACGGGGAA CATCTGCCGC 
TCGCCGATGG CCGAGGTAGT GCTCGGCGAG CGCTTCGCCG ACGCCGGGCT GGACGGACGC
GTGGTCGTGG ACTCCGCCGG CATCAGCGAC GGGGAGCGCG GCAACCCGAT CGACCGGCGG
GCGCGCGCCG TGCTGGCGGA GCACGGCTAC CCGGTGCCGT CCCGCGAGGC GCGGCAGGTC
ACGCCGTCCG ACGTCGCCGA GCCCGACCTT CTGCTGGCCA TGACGGACGC GCACGCGCGC
GCCCTGCGGC GGCTCGGCGC TCGTGAGGAC CAGGTGCGGC TGTACCGGTC GTTCGAGCCA
GACGCCGGTG AGGCACCGCT CGACGTCCCC GACCCGTGGT ACGGCGACCG GGAGGACTTC
GAGGAGTGCC TCGCGACGGT CGAGGCCGGG GCGCCGGGCA TCGTCGCGTA CGTGCAGGAG
CGGGTCGGCG GATGA
 
Protein sequence
MSTGSAPFRV LVVCTGNICR SPMAEVVLGE RFADAGLDGR VVVDSAGISD GERGNPIDRR 
ARAVLAEHGY PVPSREARQV TPSDVAEPDL LLAMTDAHAR ALRRLGARED QVRLYRSFEP
DAGEAPLDVP DPWYGDREDF EECLATVEAG APGIVAYVQE RVGG