| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51790 |
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| Symbol | scrY-1 |
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| ID | 7764016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5274273 |
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| End bp | 5275892 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643807995 |
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| Product | sucrose porin |
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| Protein accession | YP_002802229 |
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| Protein GI | 226947156 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.892988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCCG CGGCCTGTCG CCACTGGGCT GGCTTTTCCC TGCTTTTTCT CTCCACCCAT
CTCCTGGCTG CACCGGCGCC GAGCGTCGAG GAGCGCCTCG CCCGGCTCGA GGCCAGGACC
ATCGCCGCCG AGAGGCGGGC GGCGGCAGCC GAGGCCGATG CCGCTCGATT GCGCAGGGAG
GTCGAGCGGC TCGACAGACA GTTCGCCGTT AATTCCTCGT TGCCCACACA ATTACAGCTG
TCGCTCGGCG AGCGAGTCGC CCAGATCGAG GCACGCCAGC AGTCCCTGGA GACCCGCACC
TCGACACTGG CGTCTTCGGT GGATTCGATC GAGGACCTGA CGGAGGGCTT CTCCTTTGGC
GCCTATGCCC GTTCCGGCAT GATGACCAAT GGAAGCGGCG GCGGTCGTGG TGGCCCCAAC
GTGACCCCCG CCGGCTCGAT AGGTGGGTCC GTCGGCCGGC TCGGCAATGA GGTCGACACC
TACGTGGAGG CGAAATTCTC GAAGGAAACC CAGGCCAGCA ACGGCACGCG CTCGAAGTAC
ATGTTTGCGA TCGCCGATGG GGTGGAAACC CCCAACGACT GGACCTCGGG CGATAGCTCG
CTCAACGTTC GCCAGGTATA TGCCGAACTC GGCAATCTGG CGTCGTTCCA GGACATTCCC
ATGTTGCGCG ACGCCACCAT CTGGGCCGGC ACGCGCTTCG ACCGGGACAA TTACGACATC
CACTGGCTCG ACCGGGGCAT TGTTTTCCTG GCCGGAACCG GTGGCGGCAT CTACGACGTG
CGGCCGACCG ACGGCTGGCG CCTCAATGCC TCGCTGATGA GTCGCTCCTA CGGCGATTTC
GGCACGGAGA CGAACAAGGA CATCAGGACT TATGTCGCCA CCCTCAACCA GTATTTCGAT
GACGATCGCT GGCAACTCAT GCTGAGCGCG ATTTCTTCGG GCCAGAACAA TGACAAGCTG
AACGGTGACA AGAGGAAGCT ATCCGACGAG GACAGCCGAG TGAACAAGGC GGGGTTCAGT
CCCGGTGAAA AGGGCTGGCA TGGCATGTTC GCCTATCACC GGCCGGATTT TTTCGGTGCT
GAAGGCTTCT TCAAGACCGC GCTGCTGTAC GGCAAGGGGC TGGGAGGGGA GGTCAATACC
ATCGGCGGCG ATGGCGAACT GCTCGATGAA GCCGAAACGC TGCGCCTGGC GATTTATGGC
CATACCCGTC TGAACGACGA TTGGCGCATC GCGCCGGCCC TGATTGCCGA AAAGAGCAAG
AACCGATATG TGCCCGACGA CGATTACAAC TATCTGACCT TCAACGTGCG ACTGGCCAAC
GAGCTGAGCA GCAACTTCGA AATGCTCTAC GAATTTACCT GGCAGACCAT GGACCTCGAT
GCGCGTGGTT ACGATGGACG GCAAACGGCC AACGGCGATT TCTGGAAGAT TACCTTCGCG
CCGACCTTCA AGGCGGAAAC CGGGGACTTC TTCACGCGCC CCGAACTGCG CCTGTTCGCC
ACCTATATGA ATTGGGGCAA GGATCTCGAT GACTTCAGCA CAACAGACGA TTTCGGGCAG
AAGGGTTTCA AGTCCGGTGG TGTCTGGCAG CTCGGGATGC AAATGGAAAC CTGGTTCTAG
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| Protein sequence | MHSAACRHWA GFSLLFLSTH LLAAPAPSVE ERLARLEART IAAERRAAAA EADAARLRRE
VERLDRQFAV NSSLPTQLQL SLGERVAQIE ARQQSLETRT STLASSVDSI EDLTEGFSFG
AYARSGMMTN GSGGGRGGPN VTPAGSIGGS VGRLGNEVDT YVEAKFSKET QASNGTRSKY
MFAIADGVET PNDWTSGDSS LNVRQVYAEL GNLASFQDIP MLRDATIWAG TRFDRDNYDI
HWLDRGIVFL AGTGGGIYDV RPTDGWRLNA SLMSRSYGDF GTETNKDIRT YVATLNQYFD
DDRWQLMLSA ISSGQNNDKL NGDKRKLSDE DSRVNKAGFS PGEKGWHGMF AYHRPDFFGA
EGFFKTALLY GKGLGGEVNT IGGDGELLDE AETLRLAIYG HTRLNDDWRI APALIAEKSK
NRYVPDDDYN YLTFNVRLAN ELSSNFEMLY EFTWQTMDLD ARGYDGRQTA NGDFWKITFA
PTFKAETGDF FTRPELRLFA TYMNWGKDLD DFSTTDDFGQ KGFKSGGVWQ LGMQMETWF
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