Gene Avin_51530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51530 
Symbol 
ID7763992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5239761 
End bp5240546 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID643807971 
Productmultidrug efflux pump operon transcriptional regulator protein 
Protein accessionYP_002802205 
Protein GI226947132 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAG AGGCGCCGGA AAGCGGCGAA GAAGGCAAGG TGGGCGGCAT TCAGGTGATC 
GCCCGTGCCG CGGCGATCAT GCGTACCCTG GGCGAGCATC CGCAGGGGCT CAGCCTGGCG
GCCATCGCCC AGGCGGTGAA ATTGCCGCGC TCCACCGTGC AGCGCATCGT CTGCGCGCTG
GAGGCCGAAT ACCTGGTCGA GGCCATGGGG CCCAGCGGCG GCTTCCGCCT GGGCGTGGCG
GTGGGCCAAC TGGTCTACCA GACCCAGACC GACATCATTT CCCTGGTGCG GCCCTATCTG
GAGTGCCTGT CGAACTGGTT GCAGGAGTCG GTGTCCCTGT CCAAGCAGGC CGGCGAGAAG
ATCCAGGTGA TCGACCGCAT CGTCGCCGAG CGCGATCTGC GCGTGGTCTT TCCCATCGGC
GTCTTCGCCC CCATGCACTC GACCTCGGCC GGCAAGGTGC TGCTGGCCGG CCTCGACGAC
GCCGCTGTGC GCGACCTTTT GCCCGATCCG CTGCCGCAGA TGACCCGCAA CACCCGCGAC
CTGCCGGCCC TGCTGGCCGA GCTGGCGGAG ATCCGCGAGA CCGGCTTCAC CTTCGACCAC
GGGGAGTGCA GCGAAGGCAT CAGCGGCGGC TCGGTGTCCC TGGACACCTA CCTGGGCCGC
TACGCCATCT CCGTGGTATT GCCCACCGCG CGCGCCGCCC GACGCGTCGA GGCCATCCGC
GAGGCGCTAC TGGCCTGCAA GCGCGACATC GAGCGGGCGA TCGGCGGTAC CGCCTGCCGG
CGTTGA
 
Protein sequence
MTREAPESGE EGKVGGIQVI ARAAAIMRTL GEHPQGLSLA AIAQAVKLPR STVQRIVCAL 
EAEYLVEAMG PSGGFRLGVA VGQLVYQTQT DIISLVRPYL ECLSNWLQES VSLSKQAGEK
IQVIDRIVAE RDLRVVFPIG VFAPMHSTSA GKVLLAGLDD AAVRDLLPDP LPQMTRNTRD
LPALLAELAE IRETGFTFDH GECSEGISGG SVSLDTYLGR YAISVVLPTA RAARRVEAIR
EALLACKRDI ERAIGGTACR R